RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 TFF3Q07654 80 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
MKS1-210ENST00000581180 ALG10Q5BKT4 473 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 ZNF474Q6S9Z5 364 aaPredicted RBP13.37□□□□□ -0.27
MKS1-210ENST00000581180 CD300LDQ6UXZ3 194 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 AAED1Q7RTV5 226 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
MKS1-210ENST00000581180 WDFY1Q8IWB7 410 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 FEVQ99581 238 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 ENKD1Q9H0I2 346 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 INIPQ9NRY2 104 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 PARPBPQ9NWS1 579 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 MED29Q9NX70 200 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
MKS1-210ENST00000581180 NPIPB13A6NJU9 1138 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 NPIPB4C9JG80 1138 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
MKS1-210ENST00000581180 ADAP00813 363 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
MKS1-210ENST00000581180 POU2F1P14859 743 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 IFNGR1P15260 489 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 PRKACGP22612 351 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 SELENOPP49908 381 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 ASCL1P50553 236 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 ANKRD34AQ69YU3 496 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 THSD4Q6ZMP0 1018 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 RASSF6Q6ZTQ3 369 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 SLC35D2Q76EJ3 337 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 KIF18BQ86Y91 864 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 APH1AQ96BI3 265 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 GPX7Q96SL4 187 aaPredicted RBP13.36□□□□□ -0.27
MKS1-210ENST00000581180 NIPSNAP1Q9BPW8 284 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 SEMA6AQ9H2E6 1030 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 KCNJ16Q9NPI9 418 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 PRSS50Q9UI38 385 aa13.36□□□□□ -0.27
MKS1-210ENST00000581180 USP9YO00507 2555 aaPredicted RBP13.36□□□□□ -0.27
MKS1-210ENST00000581180 SLC35F4A4IF30 521 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 EEF1E1-BLOC1S5C9J1V9 151 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 MCIDASD6RGH6 385 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 EEF1E1O43324 174 aaKnown RBP13.35□□□□□ -0.27
MKS1-210ENST00000581180 SERPINI2O75830 405 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 NDUFB2O95178 105 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 CNOT4O95628 575 aaKnown RBP13.35□□□□□ -0.27
MKS1-210ENST00000581180 IGHMP01871 453 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 ANXA8P13928 327 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 ARHGDIAP52565 204 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 CTXN1P60606 82 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 ELF3P78545 371 aaPredicted RBP13.35□□□□□ -0.27
MKS1-210ENST00000581180 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 NIPAL3Q6P499 406 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 FAHD1Q6P587 224 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 ZNF620Q6ZNG0 422 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 LUZP2Q86TE4 346 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 IGFN1Q86VF2 1251 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 HIPK1Q86Z02 1210 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 ZNF100Q8IYN0 542 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 TMEM123Q8N131 208 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 CLDN22Q8N7P3 220 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 OR6X1Q8NH79 312 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 STMN2Q93045 179 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 GTPBP3Q969Y2 492 aaKnown RBP13.35□□□□□ -0.27
MKS1-210ENST00000581180 OR2M2Q96R28 347 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 EMC6Q9BV81 110 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 GABARAPL1Q9H0R8 117 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 OR52D1Q9H346 318 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 TXNIPQ9H3M7 391 aa13.35□□□□□ -0.27
MKS1-210ENST00000581180 A0A1W2PRG6 482 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 RRP9O43818 475 aaKnown RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 AKAP8O43823 692 aaKnown RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 BCL10O95999 233 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 CD14P08571 375 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 ZNF23P17027 643 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 GSTM3P21266 225 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 PCYT1AP49585 367 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 BIDP55957 195 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 COX10Q12887 443 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 MELKQ14680 651 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 TAF11Q15544 211 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 ACKR1Q16570 336 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 RFX4Q33E94 735 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 TSPO2Q5TGU0 170 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 FBXW9Q5XUX1 488 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 SMARCD3Q6STE5 483 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 KLHL17Q6TDP4 642 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 BEND4Q6ZU67 534 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 ZNF771Q7L3S4 317 aaPredicted RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 FAM122BQ7Z309 247 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 STK32CQ86UX6 486 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 GABRG1Q8N1C3 465 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 PQLC1Q8N2U9 271 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 SVOPLQ8N434 492 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 FANK1Q8TC84 345 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 ASB10Q8WXI3 467 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 RNASE6Q93091 150 aaKnown RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 ADAD1Q96M93 576 aaKnown RBP13.34□□□□□ -0.27
MKS1-210ENST00000581180 LINC00470Q9BZP3 86 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 SLCO5A1Q9H2Y9 848 aa13.34□□□□□ -0.27
MKS1-210ENST00000581180 NRIP3Q9NQ35 241 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms