RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 Q6ZSV7 163 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 R3HCC1LQ7Z5L2 792 aaKnown RBP6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 ZNF584Q8IVC4 421 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 TMEM86BQ8N661 226 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 POU5F2Q8N7G0 328 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 OR10S1Q8NGN2 331 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 FAM76AQ8TAV0 307 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 ADAMTS15Q8TE58 950 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 CCL17Q92583 94 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 DACT3Q96B18 629 aaPredicted RBP6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 PPCDCQ96CD2 204 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 TMEM237Q96Q45 408 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 OR7D2Q96RA2 312 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 SLC30A2Q9BRI3 323 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 REEP4Q9H6H4 257 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 SH3BP4Q9P0V3 963 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 MKLN1Q9UL63 735 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 JRKLQ9Y4A0 524 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 CCL27Q9Y4X3 112 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 NOX1Q9Y5S8 564 aa6.44□□□□□ -1.38
SMARCE1-217ENST00000580654 AGAP5A6NIR3 686 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 CLDN24A6NM45 220 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ADARB2-AS1A8MUL3 147 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 F5H0A9 414 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 EIF3HO15372 352 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 GPR137BO60478 399 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 SLC43A1O75387 559 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 MPIG6BO95866 241 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ENO1P06733 434 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ZNF250P15622 560 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 TACR3P29371 465 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 IDH2P48735 452 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 SERPINB8P50452 374 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 RPL15P61313 204 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 DBPQ10586 325 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 NAB1Q13506 487 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 TP53BP2Q13625 1128 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 GSG1Q2KHT4 349 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 PRAMEF8Q5VWM4 474 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 PRAMEF7Q5VXH5 474 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 RGS7BPQ6MZT1 257 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ZNF620Q6ZNG0 422 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 EIF3MQ7L2H7 374 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 HMGN2P46Q86SG4 172 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 CMIPQ8IY22 773 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 KDM8Q8N371 416 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 PAQR4Q8N4S7 273 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ZSCAN4Q8NAM6 433 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 SGCDQ92629 289 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 PHF21AQ96BD5 680 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 DDIT4LQ96D03 193 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ZG16BQ96DA0 208 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 DMRTB1Q96MA1 342 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 IQCGQ9H095 443 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 MRPL46Q9H2W6 279 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 SAP30LQ9HAJ7 183 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 PATZ1Q9HBE1 687 aaKnown RBP6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 NOX4Q9NPH5 578 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 SLC7A8Q9UHI5 535 aa6.43□□□□□ -1.38
SMARCE1-217ENST00000580654 ZNF99A8MXY4 864 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 TM9SF1O15321 606 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 IGHV1-46P01743 117 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 GPIP06744 558 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 CHRM4P08173 479 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 MYZAPP0CAP1 466 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 CD79AP11912 226 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 SDC1P18827 310 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 STX2P32856 288 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 GIPRP48546 466 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 PTDSS1P48651 473 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 CCT3P49368 545 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 POLR2HP52434 150 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 CLDN17P56750 224 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 KLF3P57682 345 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 RPS26P62854 115 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 MRPS25P82663 173 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 GALK2Q01415 458 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 RAB39AQ14964 217 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 TMEM95Q3KNT9 176 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 TMEM225Q6GV28 225 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 TYW3Q6IPR3 259 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 SYT9Q86SS6 491 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 CCDC36Q8IYA8 594 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 SPC24Q8NBT2 197 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 CLHC1Q8NHS4 586 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 PSMA8Q8TAA3 256 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 FGFBP3Q8TAT2 258 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 DYRK2Q92630 601 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 ELMOD3Q96FG2 381 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 FCRL1Q96LA6 429 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 TSSK3Q96PN8 268 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 DIRC2Q96SL1 478 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 MRPL57Q9BQC6 102 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 ZNF350Q9GZX5 532 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 C16orf95Q9H693 158 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 TNFRSF12AQ9NP84 129 aa6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 EXOSC3Q9NQT5 275 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-217ENST00000580654 DECR2Q9NUI1 292 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms