RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 OR2T33Q8NG76 320 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 FNDC8Q8TC99 324 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 GPX7Q96SL4 187 aaPredicted RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 SFXN3Q9BWM7 321 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 POLDIP3Q9BY77 421 aaKnown RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 NKX1-2Q9UD57 310 aaPredicted RBP12.72□□□□□ -0.37
SKA2-205ENST00000580541 RCE1Q9Y256 329 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
SKA2-205ENST00000580541 DOCK7Q96N67 2140 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 ZNF716A6NP11 495 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 CENPBD1B2RD01 187 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 XKRYO14609 159 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 ARPC3O15145 178 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 AHCYL1O43865 530 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 F13BP05160 661 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 IFNGR1P15260 489 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 POU1F1P28069 291 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 GIPRP48546 466 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 CRISP1P54107 249 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 RPL27P61353 136 aaKnown RBP12.71□□□□□ -0.37
SKA2-205ENST00000580541 SLC36A3Q495N2 470 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 SLC27A4Q6P1M0 643 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 AAED1Q7RTV5 226 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 CNEP1R1Q8N9A8 125 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 OR6K3Q8NGY3 331 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 OR6X1Q8NH79 312 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 MOSPD2Q8NHP6 518 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 ASB5Q8WWX0 329 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 SAMD8Q96LT4 415 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 DMRTA2Q96SC8 542 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 TSSK6Q9BXA6 273 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 PIGMQ9H3S5 423 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 NRIP3Q9NQ35 241 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 B3GAT1Q9P2W7 334 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 REV1Q9UBZ9 1251 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 SEC14L4Q9UDX3 406 aa12.71□□□□□ -0.37
SKA2-205ENST00000580541 ZNF814B7Z6K7 855 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 H0YJX3 145 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 SOCS2O14508 198 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 DVL2O14641 736 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 LRRTM2O43300 516 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 SLC43A1O75387 559 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 SERPINI2O75830 405 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
SKA2-205ENST00000580541 IFNGP01579 166 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 IGHMP01871 453 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 SDHAP31040 664 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 CLDN17P56750 224 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 MYBPC1Q00872 1141 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 NPRL3Q12980 569 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 FHL1Q13642 323 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 LPCAT4Q643R3 524 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 ABHD12BQ7Z5M8 362 aaPredicted RBP12.7□□□□□ -0.38
SKA2-205ENST00000580541 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 GALNT4Q8N4A0 578 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 LRRC75AQ8NAA5 344 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 ZNF555Q8NEP9 628 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 LRRC46Q96FV0 321 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 SLC25A44Q96H78 314 aaPredicted RBP12.7□□□□□ -0.38
SKA2-205ENST00000580541 LRR1Q96L50 414 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 ERMAPQ96PL5 475 aaPredicted RBP12.7□□□□□ -0.38
SKA2-205ENST00000580541 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 KATNB1Q9BVA0 655 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 EGLN3Q9H6Z9 239 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 B3GAT2Q9NPZ5 323 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 SMPD3Q9NY59 655 aaPredicted RBP12.7□□□□□ -0.38
SKA2-205ENST00000580541 ERRFI1Q9UJM3 462 aaPredicted RBP12.7□□□□□ -0.38
SKA2-205ENST00000580541 SLC5A6Q9Y289 635 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 IER3IP1Q9Y5U9 82 aa12.7□□□□□ -0.38
SKA2-205ENST00000580541 M0R3G1 203 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 RAMP1O60894 148 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 KRT33AO76009 404 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 SOX14O95416 240 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 IGHG1P01857 330 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ZNF26P17031 533 aaPredicted RBP12.69□□□□□ -0.38
SKA2-205ENST00000580541 PEX2P28328 305 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 AGTR1P30556 359 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ACVR1BP36896 505 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 PTDSS1P48651 473 aaKnown RBP12.69□□□□□ -0.38
SKA2-205ENST00000580541 BIDP55957 195 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ERVK-25P63136 954 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ITGADQ13349 1161 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 GINS1Q14691 196 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 SNCBQ16143 134 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ACKR1Q16570 336 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 CLEC12AQ5QGZ9 265 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 NIPAL3Q6P499 406 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 SEM1Q6ZVN7 128 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ADCK1Q86TW2 530 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 KIF18BQ86Y91 864 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 GCNT2Q8N0V5 402 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 LNX2Q8N448 690 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 ARIH2OSQ8N7S6 290 aa12.69□□□□□ -0.38
SKA2-205ENST00000580541 POMGNT2Q8NAT1 580 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms