RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 GPR171O14626 319 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 TRAF3IP2O43734 574 aaPredicted RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 RAMP1O60894 148 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 CLIC3O95833 236 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 BCL10O95999 233 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 PLGP00747 810 aaPredicted RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 GNAO1P09471 354 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ABOP16442 354 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ZNF3P17036 446 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 RAP1BP61224 184 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 SNRPGP62308 76 aaKnown RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 RAP1AP62834 184 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 IL5RAQ01344 420 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 TEKQ02763 1124 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 RASGEF1BQ0VAM2 473 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 PRR30Q53SZ7 412 aaPredicted RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 GFRALQ6UXV0 394 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 NHLRC1Q6VVB1 395 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 PTCHD4Q6ZW05 846 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ADCK1Q86TW2 530 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 CCDC71Q8IV32 467 aaPredicted RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 MARVELD2Q8N4S9 558 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ARIH2OSQ8N7S6 290 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ADAD1Q96M93 576 aaKnown RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 TSPAN32Q96QS1 320 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 SNX18Q96RF0 628 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 FN3KQ9H479 309 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 RNF122Q9H9V4 155 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 CALHM2Q9HA72 323 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 EMC3Q9P0I2 261 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ZNF346Q9UL40 294 aaKnown RBP9.58□□□□□ -0.88
SS18-213ENST00000579640 LRCH1Q9Y2L9 728 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 ADAM18Q9Y3Q7 739 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 PIEZO2Q9H5I5 2752 aa9.58□□□□□ -0.88
SS18-213ENST00000579640 TLN1Q9Y490 2541 aaKnown RBP9.57□□□□□ -0.88
SS18-213ENST00000579640 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 TEX13CA0A0J9YWL9 993 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 ZNF716A6NP11 495 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 CENPBD1B2RD01 187 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 XKRYO14609 159 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 AHCYL1O43865 530 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 SERPINI2O75830 405 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 TPOP07202 933 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 HLA-DOBP13765 273 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 IFNGR1P15260 489 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 KLK2P20151 261 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 ISL1P61371 349 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 EFNB1P98172 346 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 TOP3AQ13472 1001 aaPredicted RBP9.57□□□□□ -0.88
SS18-213ENST00000579640 KRR1Q13601 381 aaKnown RBP9.57□□□□□ -0.88
SS18-213ENST00000579640 ACSF3Q4G176 576 aaPredicted RBP9.57□□□□□ -0.88
SS18-213ENST00000579640 ARMC4Q5T2S8 1044 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 KRT80Q6KB66 452 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 CREB3L2Q70SY1 520 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 P4HA3Q7Z4N8 544 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 JAZF1Q86VZ6 243 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 MCEMP1Q8IX19 187 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 ENTHD1Q8IYW4 607 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 TCEANCQ8N8B7 351 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 OR5M9Q8NGP3 310 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 RHOXF1Q8NHV9 184 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 ZNF519Q8TB69 540 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 FNDC9Q8TBE3 224 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 TMEM163Q8TC26 289 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 CPT1CQ8TCG5 803 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 ASB10Q8WXI3 467 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 WNT2BQ93097 391 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 CNBD2Q96M20 576 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 Q96M85 177 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 GLRX2Q9NS18 164 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 PNPLA3Q9NST1 481 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 KLHL13Q9P2N7 655 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 CLCF1Q9UBD9 225 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 RNF6Q9Y252 685 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 DSPP15924 2871 aaKnown RBP9.57□□□□□ -0.88
SS18-213ENST00000579640 FAM208BQ5VWN6 2430 aa9.57□□□□□ -0.88
SS18-213ENST00000579640 CD8B2A6NJW9 211 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 ZNF724A8MTY0 619 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 PRRG2O14669 202 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 HIST1H1CP16403 213 aaKnown RBP9.56□□□□□ -0.88
SS18-213ENST00000579640 PAICSP22234 425 aaKnown RBP9.56□□□□□ -0.88
SS18-213ENST00000579640 ACVR1BP36896 505 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.56□□□□□ -0.88
SS18-213ENST00000579640 MAD2L1BPQ15013 274 aaPredicted RBP9.56□□□□□ -0.88
SS18-213ENST00000579640 SLC25A30Q5SVS4 291 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 SLC35F1Q5T1Q4 408 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 EEF1A1P5Q5VTE0 462 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 MEDAGQ5VYS4 303 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 ZNF585AQ6P3V2 769 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 FAM26EQ8N5C1 309 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 ST6GALNAC3Q8NDV1 305 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 OR52E2Q8NGJ4 325 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 OR4K13Q8NH42 304 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 OR6X1Q8NH79 312 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 FBLIM1Q8WUP2 373 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 TMEM45BQ96B21 275 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 RASD2Q96D21 266 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 Q96MT0 163 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 TRIB1Q96RU8 372 aa9.56□□□□□ -0.88
SS18-213ENST00000579640 BCO1Q9HAY6 547 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms