RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 OR4K13Q8NH42 304 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 TMEM163Q8TC26 289 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 FAR1Q8WVX9 515 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 SNRNP40Q96DI7 357 aaKnown RBP12.38□□□□□ -0.43
TSEN54-206ENST00000579449 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 TUBA1CQ9BQE3 449 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 PRDM14Q9GZV8 571 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 GRHPRQ9UBQ7 328 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 GPR52Q9Y2T5 361 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 NOX1Q9Y5S8 564 aa12.38□□□□□ -0.43
TSEN54-206ENST00000579449 PKD1L2Q7Z442 2459 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 OR14I1A6ND48 311 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 RIIAD1A6NNX1 92 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 TRAF3IP2O43734 574 aaPredicted RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 CYTIPO60759 359 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 WBP4O75554 376 aaKnown RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 VAMP5O95183 116 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 BCL10O95999 233 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 IFNGP01579 166 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF43P17038 809 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 FMO3P31513 532 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ACVR1BP36896 505 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 KRR1Q13601 381 aaKnown RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 PON3Q15166 354 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 POU4F3Q15319 338 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ST3GAL2Q16842 350 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 PRR30Q53SZ7 412 aaPredicted RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 EMC4Q5J8M3 183 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 C6orf141Q5SZD1 244 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 LAIR2Q6ISS4 152 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 UGT2A3Q6UWM9 527 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 FCRLAQ7L513 359 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 BCDIN3DQ7Z5W3 292 aaKnown RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 PM20D2Q8IYS1 436 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 FAM26EQ8N5C1 309 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ARIH2OSQ8N7S6 290 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 SLC37A3Q8NCC5 494 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 SDR9C7Q8NEX9 313 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF519Q8TB69 540 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ASB10Q8WXI3 467 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 FN3KQ9H479 309 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 HINT3Q9NQE9 182 aaKnown RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 PNPLA3Q9NST1 481 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 CLN6Q9NWW5 311 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 MED29Q9NX70 200 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 MCTS1Q9ULC4 181 aaKnown RBP12.37□□□□□ -0.43
TSEN54-206ENST00000579449 BSNQ9UPA5 3926 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
TSEN54-206ENST00000579449 TLN1Q9Y490 2541 aaKnown RBP12.36□□□□□ -0.43
TSEN54-206ENST00000579449 NPIPB13A6NJU9 1138 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 FAM183AA6NL82 134 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CLCA1A8K7I4 914 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 NPIPB4C9JG80 1138 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF3P17036 446 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CDKN2AP42771 156 aaKnown RBP12.36□□□□□ -0.43
TSEN54-206ENST00000579449 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
TSEN54-206ENST00000579449 TDGF1P3P51864 188 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 RASGEF1BQ0VAM2 473 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 ITGADQ13349 1161 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CRMP1Q14194 572 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 MESTQ5EB52 335 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 TMEM201Q5SNT2 666 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 ARMC4Q5T2S8 1044 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 EEF1A1P5Q5VTE0 462 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 LEG1Q6P5S2 330 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CXXC5Q7LFL8 322 aaKnown RBP12.36□□□□□ -0.43
TSEN54-206ENST00000579449 JAZF1Q86VZ6 243 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 MED12LQ86YW9 2145 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CPOQ8IVL8 374 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 WDFY1Q8IWB7 410 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF786Q8N393 782 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 NPEPL1Q8NDH3 523 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 OR9K2Q8NGE7 335 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 OR5M9Q8NGP3 310 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 FNDC9Q8TBE3 224 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 ZPLD1Q8TCW7 415 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 LRR1Q96L50 414 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 NMNAT3Q96T66 252 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 DDOQ99489 341 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 SF3B5Q9BWJ5 86 aaKnown RBP12.36□□□□□ -0.43
TSEN54-206ENST00000579449 PRRG4Q9BZD6 226 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 MED20Q9H944 212 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 ASF1BQ9NVP2 202 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 DNAJC27Q9NZQ0 273 aa12.36□□□□□ -0.43
TSEN54-206ENST00000579449 PRRC2CQ9Y520 2896 aaKnown RBP12.36□□□□□ -0.43
TSEN54-206ENST00000579449 A6NIZ1 184 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ZNF716A6NP11 495 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 PRR23D1E9PI22 279 aaPredicted RBP12.35□□□□□ -0.43
TSEN54-206ENST00000579449 XKRYO14609 159 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ARHGEF9O43307 516 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ENTPD6O75354 484 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 AQP8O94778 261 aa12.35□□□□□ -0.43
TSEN54-206ENST00000579449 PRR23D2P0DMB1 279 aaPredicted RBP12.35□□□□□ -0.43
TSEN54-206ENST00000579449 ACVR2AP27037 513 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms