RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 DNAH3Q8TD57 4116 aa11.81□□□□□ -0.52
CSNK1D-211ENST00000579316 NUP214P35658 2090 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TMED7-TICAM2A0A0A6YYA0 188 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 RPL36A-HNRNPH2H7BZ11 118 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 CFLARO15519 480 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 FCMRO60667 390 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 BCAS1O75363 584 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 STX11O75558 287 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 UPK3AO75631 287 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 AK1P00568 194 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 EFNA1P20827 205 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 S100A3P33764 101 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 CCT3P49368 545 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 IDH3AP50213 366 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 ATP4BP51164 291 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 MVKQ03426 396 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 LRRC74AQ0VAA2 488 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 NPRL3Q12980 569 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TP53BP2Q13625 1128 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 MAD2L1BPQ15013 274 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 FXNQ16595 210 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 PDCD4Q53EL6 469 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 ZNF362Q5T0B9 420 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 AVPI1Q5T686 147 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 Q6ZPA2 131 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 MDP1Q86V88 176 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 RETREG3Q86VR2 466 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TREML1Q86YW5 311 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 MIER2Q8N344 545 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TMEM99Q8N816 258 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 GLB1L3Q8NCI6 653 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 OR8J2Q8NGG1 315 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 UBE2FQ969M7 185 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 ZNF350Q9GZX5 532 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 SERHL2Q9H4I8 314 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.528e-7■■■■□ 19.3
CSNK1D-211ENST00000579316 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 ZIM2Q9NZV7 527 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 MYEF2Q9P2K5 600 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TESQ9UGI8 421 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 ZNF346Q9UL40 294 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TMED7Q9Y3B3 224 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 GPR45Q9Y5Y3 372 aa11.8□□□□□ -0.52
CSNK1D-211ENST00000579316 TMEM72A0PK05 275 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 LIPT2A6NK58 231 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 RNASET2O00584 256 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 PIN1P1O15428 100 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 SLC22A3O75751 556 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 NAT2P11245 290 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 ZNF35P13682 527 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 CCNA2P20248 432 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 OMGP23515 440 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 P2RY4P51582 365 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 NME5P56597 212 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 ROR2Q01974 943 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 PLAURQ03405 335 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 GPR68Q15743 365 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 MAPK14Q16539 360 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 SPDYE7PQ495Y7 208 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 ARMCX4Q5H9R4 360 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 C16orf87Q6PH81 154 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 SFXN5Q8TD22 340 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 MOAP1Q96BY2 351 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 EBF4Q9BQW3 602 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 BEX1Q9HBH7 125 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 OSGIN1Q9UJX0 560 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 TRIM33Q9UPN9 1127 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 DSPPQ9NZW4 1301 aa11.79□□□□□ -0.52
CSNK1D-211ENST00000579316 A0A0G2JND7 137 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 PRSS51A0A1B0GVH4 220 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 TRAF3IP2O43734 574 aaPredicted RBP11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 AKR7A3O95154 331 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 VAMP5O95183 116 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 C6orf47O95873 294 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 IL6P05231 212 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 GPIP06744 558 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 GUSBP08236 651 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 RYKP34925 604 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 CRYBB2P43320 205 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 MAGEB1P43366 347 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 POLR2HP52434 150 aaKnown RBP11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 UFM1P61960 85 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 RPS23P62266 143 aaKnown RBP11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 SPANXN4Q5MJ08 99 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 ASPHD2Q6ICH7 369 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 OR4F3Q6IEY1 312 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 C9orf139Q6ZV77 190 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 CREB3L2Q70SY1 520 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 GPAT4Q86UL3 456 aa11.78□□□□□ -0.52
CSNK1D-211ENST00000579316 EPHX4Q8IUS5 362 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms