RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 LGALS3BPQ08380 585 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 ZNF672Q499Z4 452 aaPredicted RBP10.19□□□□□ -0.78
GGA3-204ENST00000578208 HIKESHIQ53FT3 197 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 ANKRD16Q6P6B7 361 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 SLC22A25Q6T423 547 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 SEZ6L2Q6UXD5 910 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 HDDC2Q7Z4H3 204 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 VTCN1Q7Z7D3 282 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 TSPYL5Q86VY4 417 aaPredicted RBP10.19□□□□□ -0.78
GGA3-204ENST00000578208 NKAIN4Q8IVV8 208 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 PGAM4Q8N0Y7 254 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 TMEM123Q8N131 208 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 LRRC75A-AS1Q8N1F1 130 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 ANKS4BQ8N8V4 417 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 ADAD1Q96M93 576 aaKnown RBP10.19□□□□□ -0.78
GGA3-204ENST00000578208 CCT8L2Q96SF2 557 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 KCNS3Q9BQ31 491 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 EMC6Q9BV81 110 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 C1QTNF6Q9BXI9 259 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 ULBP2Q9BZM5 246 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 GPR35Q9HC97 309 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 MED29Q9NX70 200 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 EGFL7Q9UHF1 273 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 MAGEL2Q9UJ55 1249 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 SAMD4AQ9UPU9 718 aaKnown RBP10.19□□□□□ -0.78
GGA3-204ENST00000578208 CCDC168Q8NDH2 2452 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 FREM1Q5H8C1 2179 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 OTOGQ6ZRI0 2925 aa10.19□□□□□ -0.78
GGA3-204ENST00000578208 HRNRQ86YZ3 2850 aaPredicted RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 A0A096LPE4 126 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 A0A1W2PPZ6 126 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 A0A1W2PRG6 482 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 HTR3EA5X5Y0 456 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 MCIDASD6RGH6 385 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 BLOC1S5-TXNDC5H3BN57 136 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 RPL36A-HNRNPH2H7BZ11 118 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 OR7A10O76100 309 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 IGF2P01344 180 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 ASAH2BP0C7U1 165 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 IFNGR1P15260 489 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 FUT1P19526 365 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CD40P25942 277 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CAPZA2P47755 286 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CSNK1A1P48729 337 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 BIDP55957 195 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 RPS4XP62701 263 aaKnown RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 ARF1P84077 181 aaKnown RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 ZP4Q12836 540 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CAMK2DQ13557 499 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 TRAM2Q15035 370 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CEACAM16Q2WEN9 425 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 SAMD4BQ5PRF9 694 aaKnown RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 GLYATQ6IB77 296 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 SLC35D2Q76EJ3 337 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 SLC46A3Q7Z3Q1 461 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 TGIF2LYQ8IUE0 185 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 C20orf196Q8IYI0 205 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 OFCC1Q8IZS5 231 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 RNF148Q8N7C7 305 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 WDR31Q8NA23 367 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CCDC197Q8NCU1 140 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 PFN4Q8NHR9 129 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 MAGEE2Q8TD90 523 aaPredicted RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 SMAP2Q8WU79 429 aaPredicted RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 GTPBP3Q969Y2 492 aaKnown RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 PERPQ96FX8 193 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 LRR1Q96L50 414 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 CRLF2Q9HC73 371 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 MEPEQ9NQ76 525 aaPredicted RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 CISD1Q9NZ45 108 aaKnown RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 A4GNTQ9UNA3 340 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 POFUT2Q9Y2G5 429 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 FAM32AQ9Y421 112 aaKnown RBP10.18□□□□□ -0.78
GGA3-204ENST00000578208 SPG11Q96JI7 2443 aa10.18□□□□□ -0.78
GGA3-204ENST00000578208 ABCA4P78363 2273 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 ARPC4-TTLL3A0A0A6YYG9 625 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 ZNF99A8MXY4 864 aaPredicted RBP10.17□□□□□ -0.78
GGA3-204ENST00000578208 ENTPD5O75356 428 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 BCL10O95999 233 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 IFI30P13284 250 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 CD99P14209 185 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 TCN1P20061 433 aaPredicted RBP10.17□□□□□ -0.78
GGA3-204ENST00000578208 YAP1P46937 504 aaKnown RBP10.17□□□□□ -0.78
GGA3-204ENST00000578208 DAP3P51398 398 aaKnown RBP10.17□□□□□ -0.78
GGA3-204ENST00000578208 SLC25A3Q00325 362 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 Q5PR19 223 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 LINGO2Q7L985 606 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 RRM2BQ7LG56 351 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 CCDC36Q8IYA8 594 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 CDK20Q8IZL9 346 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 LRRC17Q8N6Y2 441 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 OR6X1Q8NH79 312 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 NANOS1Q8WY41 292 aaKnown RBP10.17□□□□□ -0.78
GGA3-204ENST00000578208 BCL2L2Q92843 193 aaPredicted RBP10.17□□□□□ -0.78
GGA3-204ENST00000578208 NEUROG1Q92886 237 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 BOD1Q96IK1 185 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 TXNDC15Q96J42 360 aa10.17□□□□□ -0.78
GGA3-204ENST00000578208 SLC38A2Q96QD8 506 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms