RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 TMEM247A6NEH6 219 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 M0R3G1 203 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 SEC14L2O76054 403 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 UBL3O95164 117 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 KRT75O95678 551 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 PTDSS1P48651 473 aaKnown RBP11.44□□□□□ -0.58
COPS3-214ENST00000577246 SEC24CP53992 1094 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 CRISP3P54108 245 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 MAD2L1BPQ15013 274 aaPredicted RBP11.44□□□□□ -0.58
COPS3-214ENST00000577246 FXNQ16595 210 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 FAM69AQ5T7M9 428 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 ZNF836Q6ZNA1 936 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 ZNF627Q7L945 461 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 VRK2Q86Y07 508 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 TMEM123Q8N131 208 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 ZDHHC22Q8N966 263 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 KIF18AQ8NI77 898 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 TIMD4Q96H15 378 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 LRR1Q96L50 414 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 SLC17A7Q9P2U7 560 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 B3GAT1Q9P2W7 334 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 ZNF443Q9Y2A4 671 aaPredicted RBP11.44□□□□□ -0.58
COPS3-214ENST00000577246 POFUT2Q9Y2G5 429 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 CORINQ9Y5Q5 1042 aa11.44□□□□□ -0.58
COPS3-214ENST00000577246 PLPP2O43688 288 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 NCR1O76036 304 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 PRSS23O95084 383 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 AVPP01185 164 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 MT-ND5P03915 603 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 MYZAPP0CAP1 466 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 NAT2P11245 290 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 ARRB2P32121 409 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 RAD52P43351 418 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 PIGFQ07326 219 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 ZP4Q12836 540 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 CAMK2DQ13557 499 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 MFSD13AQ14CX5 517 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 MSMPQ1L6U9 139 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 RGS7BPQ6MZT1 257 aaPredicted RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 ZNF621Q6ZSS3 439 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 H1FNTQ75WM6 255 aaPredicted RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 NET1Q7Z628 596 aaPredicted RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 UEVLDQ8IX04 471 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 C20orf196Q8IYI0 205 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 EIF1ADQ8N9N8 165 aaKnown RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 ADPRHL1Q8NDY3 354 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 SLC38A4Q969I6 547 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 SLC35B4Q969S0 331 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 PPP1R36Q96LQ0 422 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 PTDSS2Q9BVG9 487 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 SPATA9Q9BWV2 254 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 C12orf10Q9HB07 376 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 ESM1Q9NQ30 184 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 HINT3Q9NQE9 182 aaKnown RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 THUMPD1Q9NXG2 353 aaKnown RBP11.43□□□□□ -0.58
COPS3-214ENST00000577246 SLCO1C1Q9NYB5 712 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 NKIRAS2Q9NYR9 191 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 RPS6KB2Q9UBS0 482 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 IFT52Q9Y366 437 aa11.43□□□□□ -0.58
COPS3-214ENST00000577246 C17orf100A8MU93 164 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 CLDN25C9JDP6 229 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 M0R082 166 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 FZD7O75084 574 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 ADRA2CP18825 462 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 GIPRP48546 466 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 KLF3P57682 345 aaPredicted RBP11.42□□□□□ -0.58
COPS3-214ENST00000577246 RAB1AP62820 205 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 MVKQ03426 396 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 CHI3L2Q15782 390 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 MOGQ16653 247 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 PDCD4Q53EL6 469 aaKnown RBP11.42□□□□□ -0.58
COPS3-214ENST00000577246 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 LRP11Q86VZ4 500 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 ZNF417Q8TAU3 575 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 PNPT1Q8TCS8 783 aaKnown RBP11.42□□□□□ -0.58
COPS3-214ENST00000577246 TCP10LQ8TDR4 215 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 RAB1CQ92928 201 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 KTI12Q96EK9 354 aaPredicted RBP11.42□□□□□ -0.58
COPS3-214ENST00000577246 ZNF587Q96SQ5 575 aaPredicted RBP11.42□□□□□ -0.58
COPS3-214ENST00000577246 GPA33Q99795 319 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 RHOXF2Q9BQY4 288 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 ULBP2Q9BZM5 246 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 C7orf69Q9H7B7 122 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 TAAR3PQ9P1P4 343 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 MYEF2Q9P2K5 600 aaKnown RBP11.42□□□□□ -0.58
COPS3-214ENST00000577246 FZR1Q9UM11 496 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 PPIAL4AQ9Y536 164 aa11.42□□□□□ -0.58
COPS3-214ENST00000577246 NUP214P35658 2090 aaPredicted RBP11.41□□□□□ -0.58
COPS3-214ENST00000577246 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
COPS3-214ENST00000577246 TLDC2A0PJX2 215 aa11.41□□□□□ -0.58
COPS3-214ENST00000577246 ZNF726A6NNF4 738 aa11.41□□□□□ -0.58
COPS3-214ENST00000577246 POM121CA8CG34 1229 aa11.41□□□□□ -0.58
COPS3-214ENST00000577246 TPD52L2O43399 206 aaKnown RBP11.41□□□□□ -0.58
COPS3-214ENST00000577246 TRAF3IP2O43734 574 aaPredicted RBP11.41□□□□□ -0.58
COPS3-214ENST00000577246 CDC14BO60729 498 aa11.41□□□□□ -0.58
COPS3-214ENST00000577246 DEAF1O75398 565 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms