RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 YAP1P46937 504 aaKnown RBP20.61■□□□□ 0.89
SNF8-217ENST00000576353 FOXD4Q12950 439 aaPredicted RBP20.61■□□□□ 0.89
SNF8-217ENST00000576353 SPATS1Q496A3 300 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 ADAM5Q6NVV9 412 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 SLC46A3Q7Z3Q1 461 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 NANOGNBQ7Z5D8 188 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 CYP4Z1Q86W10 505 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 LURAP1LQ8IV03 231 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 OFCC1Q8IZS5 231 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 OR1K1Q8NGR3 316 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 PFN4Q8NHR9 129 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 NSL1Q96IY1 281 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 TXNDC15Q96J42 360 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 LRR1Q96L50 414 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 GORASP2Q9H8Y8 452 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 DCAF13Q9NV06 445 aaKnown RBP20.61■□□□□ 0.89
SNF8-217ENST00000576353 BEX4Q9NWD9 120 aaPredicted RBP20.61■□□□□ 0.89
SNF8-217ENST00000576353 MED29Q9NX70 200 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 TAS2R5Q9NYW4 299 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 NPAP1Q9NZP6 1156 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 SNX13Q9Y5W8 968 aa20.61■□□□□ 0.89
SNF8-217ENST00000576353 SLC35F4A4IF30 521 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 HS3ST1O14792 307 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 RNF13O43567 381 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 SERPINI2O75830 405 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 OR7A10O76100 309 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 TCN1P20061 433 aaPredicted RBP20.6■□□□□ 0.89
SNF8-217ENST00000576353 PAX7P23759 505 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 PTAFRP25105 342 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 ZNF83P51522 516 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 TRAM2Q15035 370 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 FXNQ16595 210 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 ANKRD16Q6P6B7 361 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 LINGO2Q7L985 606 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 C20orf196Q8IYI0 205 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 DEFB107AQ8IZN7 70 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 LIPHQ8WWY8 451 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 AKAP1Q92667 903 aaKnown RBP eCLIP20.6■□□□□ 0.89
SNF8-217ENST00000576353 RADILQ96JH8 1075 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 PIP5K1AQ99755 562 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 EMC6Q9BV81 110 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 GPR35Q9HC97 309 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 B3GAT2Q9NPZ5 323 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 CD300AQ9UGN4 299 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 MAGEL2Q9UJ55 1249 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 MGAT4BQ9UQ53 548 aa20.6■□□□□ 0.89
SNF8-217ENST00000576353 BLOC1S5-TXNDC5H3BN57 136 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 HOXB1P14653 301 aaPredicted RBP20.59■□□□□ 0.89
SNF8-217ENST00000576353 IFNGR1P15260 489 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 TBRG1Q3YBR2 411 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 HIKESHIQ53FT3 197 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 CARD17Q5XLA6 110 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 SLC35D2Q76EJ3 337 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 ZNF611Q8N823 705 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 FAM156AQ8NDB6 213 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 MAGEE2Q8TD90 523 aaPredicted RBP20.59■□□□□ 0.89
SNF8-217ENST00000576353 ADAD1Q96M93 576 aaKnown RBP20.59■□□□□ 0.89
SNF8-217ENST00000576353 CCL19Q99731 98 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 CRLF2Q9HC73 371 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 C20orf141Q9NUB4 165 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 RHCGQ9UBD6 479 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 FAM32AQ9Y421 112 aaKnown RBP20.59■□□□□ 0.89
SNF8-217ENST00000576353 ENPP4Q9Y6X5 453 aa20.59■□□□□ 0.89
SNF8-217ENST00000576353 B2RBV5 119 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 J3KTA2 159 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 M0R3G1 203 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 FFAR1O14842 300 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 UBE2NP61088 152 aaKnown RBP20.58■□□□□ 0.89
SNF8-217ENST00000576353 OR6N1Q8NGY5 312 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 OR6X1Q8NH79 312 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 BCL2L2Q92843 193 aaPredicted RBP20.58■□□□□ 0.89
SNF8-217ENST00000576353 C1QTNF6Q9BXI9 259 aa20.58■□□□□ 0.89
SNF8-217ENST00000576353 PRR14LQ5THK1 2151 aa20.58■□□□□ 0.88
SNF8-217ENST00000576353 M0R1B8 84 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 BIDP55957 195 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 ARF1P84077 181 aaKnown RBP20.57■□□□□ 0.88
SNF8-217ENST00000576353 CAMK2DQ13557 499 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 CEACAM16Q2WEN9 425 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 ZNF672Q499Z4 452 aaPredicted RBP20.57■□□□□ 0.88
SNF8-217ENST00000576353 RNF113BQ8IZP6 322 aaKnown RBP20.57■□□□□ 0.88
SNF8-217ENST00000576353 LILRB1Q8NHL6 650 aaPredicted RBP20.57■□□□□ 0.88
SNF8-217ENST00000576353 BPIFA2Q96DR5 249 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 ANKRD19PQ9H560 264 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 MOV10Q9HCE1 1003 aaKnown RBP20.57■□□□□ 0.88
SNF8-217ENST00000576353 MAN2C1Q9NTJ4 1040 aa20.57■□□□□ 0.88
SNF8-217ENST00000576353 ARPC4-TTLL3A0A0A6YYG9 625 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 ABCD4O14678 606 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 TMCC2O75069 709 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 BCL10O95999 233 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 IFI30P13284 250 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 CALB2P22676 271 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 CD40P25942 277 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 RPL18Q07020 188 aaKnown RBP20.56■□□□□ 0.88
SNF8-217ENST00000576353 DEPDC4Q8N2C3 294 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 RBM15BQ8NDT2 890 aaKnown RBP20.56■□□□□ 0.88
SNF8-217ENST00000576353 KBTBD8Q8NFY9 601 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 ACOT11Q8WXI4 607 aaPredicted RBP20.56■□□□□ 0.88
SNF8-217ENST00000576353 FBXW5Q969U6 566 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 NSMCE2Q96MF7 247 aa20.56■□□□□ 0.88
SNF8-217ENST00000576353 NMNAT1Q9HAN9 279 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms