RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ITGA5P08648 1049 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 ANPEPP15144 967 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 LGALS3BPQ08380 585 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PMS2P3Q13401 168 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PIN1Q13526 163 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PPA1Q15181 289 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PAMR1Q6UXH9 720 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 LINC00114Q6XXX2 140 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PAPD5Q8NDF8 572 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 OR6S1Q8NH40 331 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 HSD17B8Q92506 261 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 SLCO4A1Q96BD0 722 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 MPP4Q96JB8 637 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 OXGR1Q96P68 337 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 ALKBH3Q96Q83 286 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 BDH2Q9BUT1 245 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 UBTD1Q9HAC8 227 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 RNPEPL1Q9HAU8 725 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 IL1RAPQ9NPH3 570 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 CORINQ9Y5Q5 1042 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 ABCA4P78363 2273 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 A0A1W2PR80 420 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 ANKRD17O75179 2603 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 SERPINI2O75830 405 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 OR5F1O95221 314 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 CH25HO95992 272 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 HPRP00739 348 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 AHCYP23526 432 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 DNASE1P24855 282 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 LOXP28300 417 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 YAP1P46937 504 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 IST1P53990 364 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 NR1H2P55055 460 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 AKAP6Q13023 2319 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 KEAP1Q14145 624 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 TIMM23BQ5SRD1 257 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 NKAIN4Q8IVV8 208 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 UEVLDQ8IX04 471 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PQLC1Q8N2U9 271 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 SCAIQ8N9R8 606 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 POMGNT2Q8NAT1 580 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 ADPRHL1Q8NDY3 354 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 OR52N5Q8NH56 324 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 LRTOMTQ8WZ04 291 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 NINJ1Q92982 152 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 MUCL1Q96DR8 90 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 PRSS27Q9BQR3 290 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 POLR2J2Q9GZM3 115 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 POLR2J3Q9H1A7 115 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 RASSF4Q9H2L5 321 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 NGBQ9NPG2 151 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 STX18Q9P2W9 335 aaKnown RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 RIMS3Q9UJD0 308 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 EDARQ9UNE0 448 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 OR5H1A6NKK0 313 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF587BE7ETH6 402 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 C11orf98E9PRG8 122 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 MS4A18H0YCH9 400 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 H3BNX3 289 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 PDLIM1O00151 329 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 CLOCKO15516 846 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 MT-ATP6P00846 226 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 RAF1P04049 648 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 HLA-DOBP13765 273 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ARHGDIAP52565 204 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ART1P52961 327 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-216ENST00000575599 SLC34A1Q06495 639 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 PUDPQ08623 228 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF74Q16587 644 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 MS4A18Q3C1V0 323 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF704Q6ZNC4 412 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-216ENST00000575599 PIWIL3Q7Z3Z3 882 aaKnown RBP11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ABHD12BQ7Z5M8 362 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-216ENST00000575599 OR5J2Q8NH18 312 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 PFN4Q8NHR9 129 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 TMEM255BQ8WV15 326 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 PRRC1Q96M27 445 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 AMBRA1Q9C0C7 1298 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 NANSQ9NR45 359 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 DNAJB9Q9UBS3 223 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 RCE1Q9Y256 329 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 ENPP4Q9Y6X5 453 aa11.66□□□□□ -0.54
RPAIN-216ENST00000575599 PRR14LQ5THK1 2151 aa11.65□□□□□ -0.54
RPAIN-216ENST00000575599 HRNRQ86YZ3 2850 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-216ENST00000575599 TACC2O95359 2948 aa11.65□□□□□ -0.54
RPAIN-216ENST00000575599 SPG11Q96JI7 2443 aa11.65□□□□□ -0.54
RPAIN-216ENST00000575599 J3KTA2 159 aa11.65□□□□□ -0.55
RPAIN-216ENST00000575599 PLPP3O14495 311 aa11.65□□□□□ -0.55
RPAIN-216ENST00000575599 TRAF3IP2O43734 574 aaPredicted RBP11.65□□□□□ -0.55
RPAIN-216ENST00000575599 AKAP8O43823 692 aaKnown RBP11.65□□□□□ -0.55
RPAIN-216ENST00000575599 SLC43A1O75387 559 aa11.65□□□□□ -0.55
RPAIN-216ENST00000575599 E2F6O75461 281 aa11.65□□□□□ -0.55
RPAIN-216ENST00000575599 UPK3AO75631 287 aa11.65□□□□□ -0.55
RPAIN-216ENST00000575599 OR6A2O95222 327 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms