RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KTI12Q96EK9 354 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 LRR1Q96L50 414 aa8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 C16orf45Q96MC5 204 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 DENND2DQ9H6A0 471 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 NTN4Q9HB63 628 aa8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 DDX28Q9NUL7 540 aaKnown RBP8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 OPN4Q9UHM6 478 aa8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 FZR1Q9UM11 496 aa8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 NOX1Q9Y5S8 564 aa8.52□□□□□ -1.05
CALCOCO2-227ENST00000575560 A0A0G2JK05 382 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 MS4A18H0YCH9 400 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 M0R3G1 203 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 TRAF3IP2O43734 574 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 BPGMP07738 259 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 S100A3P33764 101 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 CDKN2CP42773 168 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 CRYBB2P43320 205 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 AQP5P55064 265 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 RPS23P62266 143 aaKnown RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 RAB1AP62820 205 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 MVKQ03426 396 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 C1DQ13901 141 aaKnown RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 CHI3L2Q15782 390 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 MS4A18Q3C1V0 323 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 MMEL1Q495T6 779 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 LIN52Q52LA3 116 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 GKAP1Q5VSY0 366 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 RNF220Q5VTB9 566 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 SERPINA11Q86U17 422 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 C20orf196Q8IYI0 205 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 BPIFB2Q8N4F0 458 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 TRIML2Q8N7C3 387 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 TCP10LQ8TDR4 215 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 UBLCP1Q8WVY7 318 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 TAAR8Q969N4 342 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 LRRC58Q96CX6 371 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 TEX37Q96LM6 180 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 PPP1R36Q96LQ0 422 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 PANX1Q96RD7 426 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 NKIRAS2Q9NYR9 191 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 DUSP13Q9UII6 198 aa8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF346Q9UL40 294 aaKnown RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF443Q9Y2A4 671 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO2-227ENST00000575560 C17orf100A8MU93 164 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 E9PBE3 544 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 M0R082 166 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 AIM2O14862 343 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ITM2AO43736 263 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 OR2T1O43869 369 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 CDC14BO60729 498 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 PRSS23O95084 383 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 IGHV2-5P01817 119 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 NCF2P19878 526 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 GATA3P23771 443 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 FPR2P25090 351 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 GIPRP48546 466 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 PTDSS1P48651 473 aaKnown RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 MVDP53602 400 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 CLNS1AP54105 237 aaKnown RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 GALK2Q01415 458 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 MFSD13AQ14CX5 517 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 AVPI1Q5T686 147 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 DCAF12L2Q5VW00 463 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF813Q6ZN06 617 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF621Q6ZSS3 439 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 H1FNTQ75WM6 255 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF584Q8IVC4 421 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 WDFY1Q8IWB7 410 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 GSPT2Q8IYD1 628 aaKnown RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 LRRC34Q8IZ02 419 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 EIF1ADQ8N9N8 165 aaKnown RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF417Q8TAU3 575 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 PNPT1Q8TCS8 783 aaKnown RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 SLC38A5Q8WUX1 472 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 RAB39BQ96DA2 213 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF587Q96SQ5 575 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 C7orf69Q9H7B7 122 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF232Q9UNY5 417 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 PPIAL4AQ9Y536 164 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 WNK2Q9Y3S1 2297 aa8.5□□□□□ -1.05
CALCOCO2-227ENST00000575560 IGLV3-9A0A075B6K5 115 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 A0A1W2PPW3 197 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 POM121CA8CG34 1229 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 AKAP8O43823 692 aaKnown RBP8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 SPAG7O75391 227 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 CLPTM1O96005 669 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 HPRP00739 348 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 SERPINA5P05154 406 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 HLA-DOBP13765 273 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 ZNF250P15622 560 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 PRTN3P24158 256 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 GTF2E2P29084 291 aaKnown RBP8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 IL12AP29459 219 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 GRPRP30550 384 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 ETV4P43268 484 aa8.49□□□□□ -1.05
CALCOCO2-227ENST00000575560 UFM1P61960 85 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms