RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MFSD13AQ14CX5 517 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 LARS2Q15031 903 aaKnown RBP7.7□□□□□ -1.18
SMG6-218ENST00000575454 SYPL1Q16563 259 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 FXNQ16595 210 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ZNF813Q6ZN06 617 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ZNF627Q7L945 461 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ANKRD46Q86W74 232 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 RNF130Q86XS8 419 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 C4orf33Q8N1A6 199 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 KDM8Q8N371 416 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 RNF217Q8TC41 542 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 RAB1CQ92928 201 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 CCDC115Q96NT0 180 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 OR2M2Q96R28 347 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 SLITRK2Q9H156 845 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 UNKLQ9H9P5 680 aaKnown RBP7.7□□□□□ -1.18
SMG6-218ENST00000575454 HINT3Q9NQE9 182 aaKnown RBP7.7□□□□□ -1.18
SMG6-218ENST00000575454 RLIMQ9NVW2 624 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 MKS1Q9NXB0 559 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 ZNF232Q9UNY5 417 aa7.7□□□□□ -1.18
SMG6-218ENST00000575454 PPIAL4EA0A075B759 164 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PPIAL4CA0A0B4J2A2 164 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 IGHV1-69-2A0A0G2JMI3 117 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ZNF503-AS2A6NEH8 195 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 CCDC154A6NI56 674 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 CLDN25C9JDP6 229 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PPIAL4DF5H284 164 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 M0R3G1 203 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 DEAF1O75398 565 aaPredicted RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 NCR1O76036 304 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 UBL3O95164 117 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 KRT75O95678 551 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 GKN3PP0CG01 181 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PPIAL4FP0DN26 164 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ARRB2P32121 409 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PTDSS1P48651 473 aaKnown RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 RAB1AP62820 205 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 MVKQ03426 396 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PIGFQ07326 219 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 SLC3A1Q07837 685 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 CAMK2DQ13557 499 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 MAD2L1BPQ15013 274 aaPredicted RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 MSMPQ1L6U9 139 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 HFEQ30201 348 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PDCD4Q53EL6 469 aaKnown RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 FAM69AQ5T7M9 428 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 RNF220Q5VTB9 566 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ATG16L1Q676U5 607 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 H1FNTQ75WM6 255 aaPredicted RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 DOK3Q7L591 496 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 LRP11Q86VZ4 500 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 UEVLDQ8IX04 471 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 C20orf196Q8IYI0 205 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 TMEM123Q8N131 208 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ADPRHL1Q8NDY3 354 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 CPEB3Q8NE35 698 aaKnown RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 OR52P1PQ8NH57 321 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 KIF18AQ8NI77 898 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 POP5Q969H6 163 aaKnown RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 SLC35B4Q969S0 331 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 SLC25A28Q96A46 364 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 MS4A3Q96HJ5 214 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 MECRQ9BV79 373 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 TXLNGYQ9BZA5 131 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 C12orf10Q9HB07 376 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 DECR2Q9NUI1 292 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 THUMPD1Q9NXG2 353 aaKnown RBP7.69□□□□□ -1.18
SMG6-218ENST00000575454 TAAR3PQ9P1P4 343 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 B3GAT1Q9P2W7 334 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 P2RX2Q9UBL9 471 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ZDHHC2Q9UIJ5 367 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 BTNL2Q9UIR0 455 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 ZNF281Q9Y2X9 895 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PPIAL4AQ9Y536 164 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 PCNX3Q9H6A9 2034 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 DYSFO75923 2080 aa7.69□□□□□ -1.18
SMG6-218ENST00000575454 TMEM247A6NEH6 219 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 ZNF726A6NNF4 738 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 CLDN34H7C241 214 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 TPD52L2O43399 206 aaKnown RBP7.68□□□□□ -1.18
SMG6-218ENST00000575454 CDC14BO60729 498 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 FZD7O75084 574 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 FSHBP01225 129 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 IGHV2-5P01817 119 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 SERPINA5P05154 406 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 S100A3P33764 101 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 MAGEB1P43366 347 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 RPS5P46782 204 aaKnown RBP7.68□□□□□ -1.18
SMG6-218ENST00000575454 GIPRP48546 466 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 ATP4BP51164 291 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 CRISP3P54108 245 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 KLF3P57682 345 aaPredicted RBP7.68□□□□□ -1.18
SMG6-218ENST00000575454 CCL8P80075 99 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 BAMBIQ13145 260 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 AVPI1Q5T686 147 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 RGS7BPQ6MZT1 257 aaPredicted RBP7.68□□□□□ -1.18
SMG6-218ENST00000575454 ZNF621Q6ZSS3 439 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 DPPA2Q7Z7J5 298 aa7.68□□□□□ -1.18
SMG6-218ENST00000575454 LRRC34Q8IZ02 419 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms