RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 WFDC6Q9BQY6 131 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 EMC6Q9BV81 110 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 GMEB1Q9Y692 573 aa18.34■□□□□ 0.53
CHRNB1-206ENST00000574054 LOC102725191A0A1B0GVB3 256 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF503-AS2A6NEH8 195 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF99A8MXY4 864 aaPredicted RBP18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 MS4A18H0YCH9 400 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 BGLAPP02818 100 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 THBS4P35443 961 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 NR4A2P43354 598 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 POU3F1Q03052 451 aaPredicted RBP18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 HGFACQ04756 655 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 EFNB3Q15768 340 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 CYP51A1Q16850 503 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 MS4A18Q3C1V0 323 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 PHYHD1Q5SRE7 291 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 DLEU7Q6UYE1 221 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 C20orf196Q8IYI0 205 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 NUP37Q8NFH4 326 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 OR6S1Q8NH40 331 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 FOXN4Q96NZ1 517 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 MOGAT1Q96PD6 335 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 BEX2Q9BXY8 128 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 PLK3Q9H4B4 646 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 RABEP2Q9H5N1 569 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 B3GAT2Q9NPZ5 323 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 MED29Q9NX70 200 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 CUBNO60494 3623 aa18.33■□□□□ 0.52
CHRNB1-206ENST00000574054 IGHV2OR16-5A0A0B4J2B6 119 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 VSTM5A8MXK1 200 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 hCG_2039718K7EN88 272 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 M0R3H8 397 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 NDUFS8O00217 210 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 TPST2O60704 377 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 SERPINI2O75830 405 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 FAM157CP0CG43 387 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 CD79AP11912 226 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 NPR2P20594 1047 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 ARR3P36575 388 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 GZMKP49863 264 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 CDH12P55289 794 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 PUDPQ08623 228 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 IQCCQ4KMZ1 466 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 DHDDSQ86SQ9 333 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 CCDC36Q8IYA8 594 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 SCAIQ8N9R8 606 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 C11orf65Q8NCR3 313 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 SLC41A3Q96GZ6 507 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 TXNDC15Q96J42 360 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 REPIN1Q9BWE0 567 aaKnown RBP18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 RAB1BQ9H0U4 201 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 LEF1Q9UJU2 399 aaPredicted RBP18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 USP22Q9UPT9 525 aa18.32■□□□□ 0.52
CHRNB1-206ENST00000574054 LOC390937A0A1W2PQ73 354 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 SLC35F4A4IF30 521 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 VWC2LB2RUY7 222 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 LRRN3E7EW58 273 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 MFN2O95140 757 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 OPN1SWP03999 348 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 APEHP13798 732 aaKnown RBP18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 AHCYP23526 432 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 PPOXP50336 477 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 RUNDC3AQ59EK9 446 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 SPATA21Q7Z572 469 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 PTOV1Q86YD1 416 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 SVOPLQ8N434 492 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 OR6N1Q8NGY5 312 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 ANKRD27Q96NW4 1050 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 MCHR1Q99705 422 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 TMEM43Q9BTV4 400 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 SHARPINQ9H0F6 387 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF442Q9H7R0 627 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 EVA1AQ9H8M9 152 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 MYOZ1Q9NP98 299 aaPredicted RBP18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 INTS9Q9NV88 658 aaKnown RBP18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 POFUT2Q9Y2G5 429 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 NOX1Q9Y5S8 564 aa18.31■□□□□ 0.52
CHRNB1-206ENST00000574054 YLPM1P49750 1951 aaKnown RBP18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 IGHV4-61A0A0C4DH41 118 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF726A6NNF4 738 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 ANGPT2O15123 496 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 HLA-HP01893 362 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 ERCC1P07992 297 aaPredicted RBP18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 MTPNP58546 118 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 SNTB2Q13425 540 aaKnown RBP18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 CAMK2DQ13557 499 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 DAG1Q14118 895 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 SWT1Q5T5J6 900 aaKnown RBP18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 ZNF813Q6ZN06 617 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 CGREF1Q99674 301 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 ULBP2Q9BZM5 246 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 CHODLQ9H9P2 273 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 NOX3Q9HBY0 568 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 DYNLRB1Q9NP97 96 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 TMEM160Q9NX00 188 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 MRPL39Q9NYK5 338 aaKnown RBP18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 LPAR3Q9UBY5 353 aa18.3■□□□□ 0.52
CHRNB1-206ENST00000574054 LOC100289279A0A1B0GTE1 492 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 SH3PXD2BA1X283 911 aa18.29■□□□□ 0.52
CHRNB1-206ENST00000574054 CPSF4LA6NMK7 179 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms