RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 EPHA3P29320 983 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 GLRXP35754 106 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 HILS1P60008 231 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 RPS23P62266 143 aaKnown RBP16.33■□□□□ 0.2
SCARF1-204ENST00000570902 MRPS11P82912 194 aaKnown RBP16.33■□□□□ 0.2
SCARF1-204ENST00000570902 EGR4Q05215 589 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 TRMT5Q32P41 509 aaKnown RBP16.33■□□□□ 0.2
SCARF1-204ENST00000570902 C5orf46Q6UWT4 87 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 SERPINA11Q86U17 422 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 CLIP4Q8N3C7 705 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF837Q96EG3 531 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-204ENST00000570902 OR2M2Q96R28 347 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 ZBTB18Q99592 522 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 SPATA9Q9BWV2 254 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 WDR55Q9H6Y2 383 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-204ENST00000570902 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 THUMPD1Q9NXG2 353 aaKnown RBP16.33■□□□□ 0.2
SCARF1-204ENST00000570902 B3GNT2Q9NY97 397 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 IFT52Q9Y366 437 aa16.33■□□□□ 0.2
SCARF1-204ENST00000570902 TRAV20A0A0B4J274 112 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 LOC102725191A0A1B0GVB3 256 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 TMEM247A6NEH6 219 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 TRPC5OSA6NMA1 111 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 RFXANKO14593 260 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 FZD7O75084 574 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 HLA-HP01893 362 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 HPXP02790 462 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 ALDOCP09972 364 aaKnown RBP16.32■□□□□ 0.2
SCARF1-204ENST00000570902 CD79AP11912 226 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 COL8A2P25067 703 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 CRATP43155 626 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 LIMS1P48059 325 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 GALK2Q01415 458 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 GKAP1Q5VSY0 366 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-204ENST00000570902 NXNQ6DKJ4 435 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 PEG10Q86TG7 708 aaKnown RBP16.32■□□□□ 0.2
SCARF1-204ENST00000570902 TMEM123Q8N131 208 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 SLC38A5Q8WUX1 472 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 SLC35B4Q969S0 331 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 KTI12Q96EK9 354 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF416Q9BWM5 594 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 DENND2DQ9H6A0 471 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-204ENST00000570902 AIG1Q9NVV5 245 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 SEC14L4Q9UDX3 406 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 MEGF8Q7Z7M0 2845 aa16.32■□□□□ 0.2
SCARF1-204ENST00000570902 A0A0G2JPF8 293 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 HNRNPCL2B2RXH8 293 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 HNRNPCL3B7ZW38 293 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 M0R082 166 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 M0R3G1 203 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 HNRNPCL1O60812 293 aaKnown RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 SEC14L2O76054 403 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 PNPP00491 289 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 HNRNPCL4P0DMR1 293 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF35P13682 527 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ETFAP13804 333 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ANPEPP15144 967 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 TCN1P20061 433 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 EPHA1P21709 976 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ALDH3B1P43353 468 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 DSTNP60981 165 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 MSMPQ1L6U9 139 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 FAM69AQ5T7M9 428 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 FAHD2BQ6P2I3 314 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 C6orf89Q6UWU4 347 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 H1FNTQ75WM6 255 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 NET1Q7Z628 596 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 CARM1Q86X55 608 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 SNX32Q86XE0 403 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 GLB1L3Q8NCI6 653 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF417Q8TAU3 575 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 SLC38A4Q969I6 547 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 FAHD2AQ96GK7 314 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 MS4A3Q96HJ5 214 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF587Q96SQ5 575 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 SYT3Q9BQG1 590 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF385DQ9H6B1 395 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 C12orf10Q9HB07 376 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 B3GAT2Q9NPZ5 323 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF275Q9NSD4 429 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 TREM2Q9NZC2 230 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 RPS6KB2Q9UBS0 482 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
SCARF1-204ENST00000570902 CHST2Q9Y4C5 530 aa16.31■□□□□ 0.2
SCARF1-204ENST00000570902 PPIHO43447 177 aaKnown RBP16.3■□□□□ 0.2
SCARF1-204ENST00000570902 RGS9O75916 674 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF14P17017 642 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-204ENST00000570902 IL12AP29459 219 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 ARFIP2P53365 341 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 MVDP53602 400 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 MYBPC1Q00872 1141 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF311Q5JNZ3 666 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 THSD4Q6ZMP0 1018 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF813Q6ZN06 617 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 UEVLDQ8IX04 471 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 C20orf196Q8IYI0 205 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 ADPRHL1Q8NDY3 354 aa16.3■□□□□ 0.2
SCARF1-204ENST00000570902 LRR1Q96L50 414 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms