RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 IL5RAQ01344 420 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 RASGEF1BQ0VAM2 473 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ITGADQ13349 1161 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 IL18R1Q13478 541 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 KEAP1Q14145 624 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 MELKQ14680 651 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 GINS1Q14691 196 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 PTGES3Q15185 160 aaKnown RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 EIF2S3LQ2VIR3 472 aaKnown RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM201Q5SNT2 666 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 C6orf52Q5T4I8 152 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 C1orf185Q5T7R7 199 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF324BQ6AW86 544 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 GPR139Q6DWJ6 353 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR2A2Q6IF42 318 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ADCK1Q86TW2 530 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 LSRQ86X29 649 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 KIF18BQ86Y91 864 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 C8orf59Q8N0T1 100 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM99Q8N816 258 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR9K2Q8NGE7 335 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 FNDC9Q8TBE3 224 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM57AQ8TBR7 257 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZPLD1Q8TCW7 415 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 RNF128Q8TEB7 428 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 OTULINQ96BN8 352 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ADAD1Q96M93 576 aaKnown RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 OXGR1Q96P68 337 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 ERMAPQ96PL5 475 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TNFRSF13CQ96RJ3 184 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 GPX7Q96SL4 187 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 MBOAT4Q96T53 435 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TM9SF2Q99805 663 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 SF3B5Q9BWJ5 86 aaKnown RBP5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 PLA2G12AQ9BZM1 189 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC25A19Q9HC21 320 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 PNPLA3Q9NST1 481 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 IL20Q9NYY1 176 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 REV1Q9UBZ9 1251 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 SH3BGRL2Q9UJC5 107 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 KLHL21Q9UJP4 597 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 RAB26Q9ULW5 256 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 EMC9Q9Y3B6 208 aa5.88□□□□□ -1.47
CTDNEP1-204ENST00000570484 TRGV8A0A0C4DH27 118 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 LOC100130705A0A1B0GUX0 176 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 NPIPB13A6NJU9 1138 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SNTNA6NMZ2 147 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF726A6NNF4 738 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZAR1LA6NP61 321 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 NPIPB4C9JG80 1138 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 H0YAE9 185 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 IDH3BO43837 385 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CYTIPO60759 359 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC43A1O75387 559 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RGS9O75916 674 aaPredicted RBP5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 KRT33AO76009 404 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RENP00797 406 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 IGHG1P01857 330 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 IGHMP01871 453 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 HOXD4P09016 255 aaPredicted RBP5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 APEHP13798 732 aaKnown RBP5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 IFNGR1P15260 489 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACVR2AP27037 513 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 GGT2P36268 569 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACVR1BP36896 505 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 BIDP55957 195 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLDN17P56750 224 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLRN1P58418 232 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RPL27P61353 136 aaKnown RBP5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RPS7P62081 194 aaKnown RBP5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 LTBQ06643 244 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CD47Q08722 323 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZP4Q12836 540 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 POU4F3Q15319 338 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SNAPC1Q16533 368 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACKR1Q16570 336 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 EMC4Q5J8M3 183 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC35F1Q5T1Q4 408 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLX4IPQ5VYV7 408 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 NSUN5P2Q63ZY6 315 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ANKRD34AQ69YU3 496 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 DNM1P34Q6PK57 102 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 PCSK4Q6UW60 755 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RPTNQ6XPR3 784 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 B3GNT6Q6ZMB0 384 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC35D2Q76EJ3 337 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 PXKQ7Z7A4 578 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CCDC103Q8IW40 242 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 LNX2Q8N448 690 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ST6GALNAC3Q8NDV1 305 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 SDR9C7Q8NEX9 313 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 NOXO1Q8NFA2 376 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR8D4Q8NGM9 314 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR6N1Q8NGY5 312 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ABHD3Q8WU67 409 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ROBO4Q8WZ75 1007 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RASD2Q96D21 266 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 GMPPAQ96IJ6 420 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms