RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 MOKQ9UQ07 419 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PMF1-BGLAPU3KQ54 211 aa14.87□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SONP18583 2426 aaKnown RBP14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 BBIP1A8MTZ0 92 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 INAFM1C9JVW0 142 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 M0R3H8 397 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 FXYD1O00168 92 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PLPP3O14495 311 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CD5LO43866 347 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SSX4O60224 188 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CECR9P0C854 216 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SLC25A16P16260 332 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ARR3P36575 388 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 EFNA4P52798 201 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CRYBA2P53672 197 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ARF1P84077 181 aaKnown RBP14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CYLC2Q14093 348 aaPredicted RBP14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 EFNB3Q15768 340 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 VMACQ2NL98 169 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CEACAM16Q2WEN9 425 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CLEC2AQ6UVW9 174 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CALHM3Q86XJ0 350 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OR5J2Q8NH18 312 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OR10A6Q8NH74 314 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 TAMM41Q96BW9 452 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 TMEM120AQ9BXJ8 343 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 POLR2J2Q9GZM3 115 aaKnown RBP14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 POLR2J3Q9H1A7 115 aaKnown RBP14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CA10Q9NS85 328 aa14.86□□□□□ -0.03
MAP1LC3B-208ENST00000570189 IGHV4-30-2A0A087WSY4 118 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 TRAPPC13A5PLN9 417 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 F12P00748 615 aaPredicted RBP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 IGF2P01344 180 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 THY1P04216 161 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 TROVE2P10155 538 aaKnown RBP eCLIP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 HLA-DOBP13765 273 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NQO1P15559 274 aaKnown RBP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PTNP21246 168 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 POU3F1Q03052 451 aaPredicted RBP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 LOXL1Q08397 574 aaPredicted RBP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZP4Q12836 540 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PMS2P3Q13401 168 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ENTPD8Q5MY95 495 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SNX32Q86XE0 403 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 IL17RDQ8NFM7 739 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ADAMTS16Q8TE57 1224 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZNF837Q96EG3 531 aaPredicted RBP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 KCNS3Q9BQ31 491 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 DENND2DQ9H6A0 471 aaPredicted RBP14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZNF442Q9H7R0 627 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 B3GNT2Q9NY97 397 aa14.85□□□□□ -0.03
MAP1LC3B-208ENST00000570189 A0A096LPE4 126 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 A0A1W2PPZ6 126 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 SLC35F4A4IF30 521 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 B9A039 149 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CRLF1O75462 422 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OPN1SWP03999 348 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 VIMP08670 466 aaKnown RBP14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PCSK6P29122 969 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MAPRE2Q15555 327 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZNF74Q16587 644 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 WDR88Q6ZMY6 472 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PRIMA1Q86XR5 153 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 OR4D11Q8NGI4 311 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 C10orf105Q8TEF2 133 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 PROX1Q92786 737 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 LRRC58Q96CX6 371 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 CCDC134Q9H6E4 229 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 MYOZ1Q9NP98 299 aaPredicted RBP14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 B3GAT2Q9NPZ5 323 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 ZNF229Q9UJW7 825 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 USP22Q9UPT9 525 aa14.84□□□□□ -0.03
MAP1LC3B-208ENST00000570189 NDUFS8O00217 210 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 SLC22A2O15244 555 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 SERPINF1P36955 418 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 PPOXP50336 477 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 ADIPOQQ15848 244 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 PHYHD1Q5SRE7 291 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 CGB2Q6NT52 195 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 ERICH5Q6P6B1 374 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 TSPYL5Q86VY4 417 aaPredicted RBP14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 MAPK1IP1LQ8NDC0 245 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 OR6X1Q8NH79 312 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 FAM168AQ92567 244 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 ZNF75AQ96N20 296 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 PLK3Q9H4B4 646 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 SAR1AQ9NR31 198 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 MED29Q9NX70 200 aa14.83□□□□□ -0.04
MAP1LC3B-208ENST00000570189 ZNF503-AS2A6NEH8 195 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 CPSF4LA6NMK7 179 aaKnown RBP14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 TP53P04637 393 aaPredicted RBP14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 ASAH2BP0C7U1 165 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 CBLP22681 906 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 CALCRP30988 508 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 ARFIP2P53365 341 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 SNRPD2P62316 118 aaKnown RBP14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 VLDLRP98155 873 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 KLF10Q13118 480 aa14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 TTC33Q6PID6 262 aaPredicted RBP14.82□□□□□ -0.04
MAP1LC3B-208ENST00000570189 MYPOPQ86VE0 399 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms