RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ING2Q9H160 280 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SPNS1Q9H2V7 528 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 CUTCQ9NTM9 273 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ARMCX1Q9P291 453 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ARL5AQ9Y689 179 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SCN8AQ9UQD0 1980 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 A0A1W2PR77 199 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 H3BN98 237 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 PLIN3O60664 434 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 JUNP05412 331 aaKnown RBP6.08□□□□□ -1.44
SMG1-217ENST00000569764 BPGMP07738 259 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SLC35E2BP0CK96 405 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 GM2AP17900 193 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 BMP7P18075 431 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 NPR2P20594 1047 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 BSGP35613 385 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 GPR12P47775 334 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SKP2Q13309 424 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SIRPB2Q5JXA9 342 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 DMRTA1Q5VZB9 504 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ZC3HC1Q86WB0 502 aaKnown RBP6.08□□□□□ -1.44
SMG1-217ENST00000569764 ERI1Q8IV48 349 aaKnown RBP6.08□□□□□ -1.44
SMG1-217ENST00000569764 OR5M3Q8NGP4 307 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 EID2BQ96D98 161 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
SMG1-217ENST00000569764 TEX101Q9BY14 249 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SRD5A3Q9H8P0 318 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ADAP2Q9NPF8 381 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 OSGIN1Q9UJX0 560 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 IKZF3Q9UKT9 509 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 BAIAP2Q9UQB8 552 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SLC17A4Q9Y2C5 497 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 A0A0G2JND7 137 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 C9JVG2 144 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 H7C2Y5 167 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 CXCR6O00574 342 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 IFNA5P01569 189 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 CD5P06127 495 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 TSPAN8P19075 237 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SPINK2P20155 84 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 TMEM249Q2WGJ8 235 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 GTDC1Q4AE62 458 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 PYCR3Q53H96 274 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 TMEM201Q5SNT2 666 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 GCNT7Q6ZNI0 430 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 GPSM1Q86YR5 675 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 NSMAFQ92636 917 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ISL2Q96A47 359 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 ZNF775Q96BV0 537 aaPredicted RBP6.08□□□□□ -1.44
SMG1-217ENST00000569764 TRMT61AQ96FX7 289 aaKnown RBP6.08□□□□□ -1.44
SMG1-217ENST00000569764 TSSK3Q96PN8 268 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SERPINI1Q99574 410 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 TBX5Q99593 518 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 RDH14Q9HBH5 336 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 PRTFDC1Q9NRG1 225 aa6.08□□□□□ -1.44
SMG1-217ENST00000569764 SH2D7A6NKC9 451 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 ZNF561-AS1K7EIQ3 104 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 IL2RAP01589 272 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 C2P06681 752 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 THBS4P35443 961 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 CYB561P49447 251 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 MANFP55145 182 aaKnown RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 INSM1Q01101 510 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 RPE65Q16518 533 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 SPATA46Q5T0L3 261 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 UGT2A3Q6UWM9 527 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PGAM4Q8N0Y7 254 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 STX19Q8N4C7 294 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 C1orf159Q96HA4 380 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 BOD1Q96IK1 185 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FOXN4Q96NZ1 517 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 KIR3DX1Q9H7L2 352 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FGF22Q9HCT0 170 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ZNF71Q9NQZ8 489 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 NUBP2Q9Y5Y2 271 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 HELZP42694 1942 aaKnown RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 CHP2O43745 196 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 MT-ND1P03886 318 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 IGHV4-34P06331 123 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 WASHC2DQ5SRD0 308 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 GALNT16Q8N428 558 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 CDYL2Q8N8U2 506 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 OR13C4Q8NGS5 318 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 MAGEE2Q8TD90 523 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 CHPT1Q8WUD6 406 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 GCDHQ92947 438 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 FAM136AQ96C01 138 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 TRIB3Q96RU7 358 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 TRAF4Q9BUZ4 470 aaPredicted RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 LHX9Q9NQ69 397 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ADA2Q9NZK5 511 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 GALPQ9UBC7 116 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 RPS6KB2Q9UBS0 482 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PLAGL1Q9UM63 463 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 FAM208BQ5VWN6 2430 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 ANTXRLA6NF34 631 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 PRR19A6NJB7 356 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 TRIM13O60858 407 aa6.07□□□□□ -1.44
SMG1-217ENST00000569764 KHDRBS3O75525 346 aaKnown RBP6.07□□□□□ -1.44
SMG1-217ENST00000569764 SC5DO75845 299 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms