RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 DCTN6O00399 190 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 WISP1O95388 367 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 HLA-DQA2P01906 255 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ADRB1P08588 477 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ARSBP15848 533 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 M6PRP20645 277 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CCR5P51681 352 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CCR6P51684 374 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 NR0B1P51843 470 aaKnown RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 TAS2R43P59537 309 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ACTC1P68032 377 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ACTA1P68133 377 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 BDH1Q02338 343 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 LGALS3BPQ08380 585 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CDK5R1Q15078 307 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF141Q15928 474 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 NTRK2Q16620 822 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 HYAL4Q2M3T9 481 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ALG10Q5BKT4 473 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 FAM209BQ5JX69 171 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 C16orf47Q6ZP98 133 aaPredicted RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ASCC1Q8N9N2 400 aaKnown RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 FAM174AQ8TBP5 190 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 METTL21AQ8WXB1 218 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ADAD1Q96M93 576 aaKnown RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF426Q9BUY5 554 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ALG12Q9BV10 488 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CYSLTR2Q9NS75 346 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ST6GALNAC2Q9UJ37 374 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF337Q9Y3M9 751 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 IGHV3-20A0A0C4DH32 117 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 PRR32B1ATL7 298 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 L7N2F9 121 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 RRP8O43159 456 aaKnown RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 SCO2O43819 266 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ORC5O43913 435 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 OR7A10O76100 309 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 UTS2O95399 124 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 OR2T7P0C7T2 308 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 TACR3P29371 465 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 RBM34P42696 430 aaKnown RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 NSDHLQ15738 373 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 HSD17B12Q53GQ0 312 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 Q5BKY6 102 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 MARCH3Q86UD3 253 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 GKN2Q86XP6 184 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 TOMM5Q8N4H5 51 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF615Q8N8J6 731 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 OR2T27Q8NH04 317 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 PTPMT1Q8WUK0 201 aaPredicted RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 THEM6Q8WUY1 208 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ACOT12Q8WYK0 555 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 MESP1Q9BRJ9 268 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CRB3Q9BUF7 120 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ULBP3Q9BZM4 244 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 FKRPQ9H9S5 495 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 PRDM9Q9NQV7 894 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 INPP5EQ9NRR6 644 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CUTCQ9NTM9 273 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF222Q9UK12 451 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 BAIAP2Q9UQB8 552 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 SPAG17Q6Q759 2223 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 IGKV1D-42A0A075B6H8 117 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 A0A0G2JK05 382 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ARHGEF9O43307 516 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 AKR7A2O43488 359 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 DOK2O60496 412 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CDC40O60508 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ICOSLGO75144 302 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 MT-ND4P03905 459 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 GIFP27352 417 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 NANOS3P60323 173 aaKnown RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 ZSWIM7Q19AV6 140 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 METAP1DQ6UB28 335 aaPredicted RBP7.98□□□□□ -1.13
LINC00558-201ENST00000569422 LINGO2Q7L985 606 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 TIGD4Q8IY51 512 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 KDM8Q8N371 416 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 MS4A15Q8N5U1 240 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 DNAAF1Q8NEP3 725 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 OR10Z1Q8NGY1 313 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 OR6N2Q8NGY6 317 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 LGALS14Q8TCE9 139 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 SMIM19Q96E16 107 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 AUNIPQ9H7T9 357 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 UBQLN4Q9NRR5 601 aa7.98□□□□□ -1.13
LINC00558-201ENST00000569422 CNTRLQ7Z7A1 2325 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 HEATR5AQ86XA9 2040 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 EFCAB7A8K855 629 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 NPIPB9F8W1W9 429 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 YES1P07947 543 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 EPXP11678 715 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 FUT7Q11130 342 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 CDK10Q15131 360 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 HLA-DQA1Q5Y7H0 255 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 SFRP4Q6FHJ7 346 aaPredicted RBP7.97□□□□□ -1.13
LINC00558-201ENST00000569422 DPY19L2P2Q6ZN68 376 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 BMPERQ8N8U9 685 aa7.97□□□□□ -1.13
LINC00558-201ENST00000569422 DPYSL5Q9BPU6 564 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms