RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 CHRFAM7AQ494W8 412 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 PODNL1Q6PEZ8 512 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 VHLLQ6RSH7 139 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 LINC00114Q6XXX2 140 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 DHDDSQ86SQ9 333 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 RETREG3Q86VR2 466 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 CCDC36Q8IYA8 594 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 C20orf196Q8IYI0 205 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 SMYD1Q8NB12 490 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 C11orf65Q8NCR3 313 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 GPR32P1Q8NGA4 272 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 SPATA3Q8NHX4 192 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 LRR1Q96L50 414 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 MAGEB18Q96M61 343 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 CGREF1Q99674 301 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 MCHR1Q99705 422 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 EMC6Q9BV81 110 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 ZNF442Q9H7R0 627 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 TMEM160Q9NX00 188 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 MRPL39Q9NYK5 338 aaKnown RBP16.4■□□□□ 0.22
SPSB3-210ENST00000568416 NDUFAF1Q9Y375 327 aa16.4■□□□□ 0.22
SPSB3-210ENST00000568416 CHD3Q12873 2000 aaKnown RBP16.4■□□□□ 0.22
SPSB3-210ENST00000568416 SLC35F4A4IF30 521 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 HMGB1P1B2RPK0 211 aaPredicted RBP16.39■□□□□ 0.21
SPSB3-210ENST00000568416 LRRN3E7EW58 273 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 M0R3H8 397 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 FMO6PO60774 539 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 SEC14L2O76054 403 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 THBS4P35443 961 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 PPOXP50336 477 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 MTPNP58546 118 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPSB3-210ENST00000568416 POU3F1Q03052 451 aaPredicted RBP16.39■□□□□ 0.21
SPSB3-210ENST00000568416 PMS2P3Q13401 168 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 DUSP7Q16829 419 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 CARD17Q5XLA6 110 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 CYB5R2Q6BCY4 276 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 ZNF613Q6PF04 617 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 SLC46A3Q7Z3Q1 461 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 MDP1Q86V88 176 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 WDFY1Q8IWB7 410 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 ANKS4BQ8N8V4 417 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 THOC1Q96FV9 657 aaKnown RBP16.39■□□□□ 0.21
SPSB3-210ENST00000568416 TXNDC15Q96J42 360 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 VRK1Q99986 396 aaPredicted RBP16.39■□□□□ 0.21
SPSB3-210ENST00000568416 MYOZ1Q9NP98 299 aaPredicted RBP16.39■□□□□ 0.21
SPSB3-210ENST00000568416 MED29Q9NX70 200 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 B3GNT2Q9NY97 397 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 USP22Q9UPT9 525 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 NOX1Q9Y5S8 564 aa16.39■□□□□ 0.21
SPSB3-210ENST00000568416 IGHV2OR16-5A0A0B4J2B6 119 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 M0QX08 132 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 PLPP3O14495 311 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 IFNA2P01563 188 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 OPN1SWP03999 348 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 C8BP07358 591 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 ZNF16P17020 682 aaPredicted RBP16.38■□□□□ 0.21
SPSB3-210ENST00000568416 NR4A2P43354 598 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 PUDPQ08623 228 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 NPTX1Q15818 432 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 CYP51A1Q16850 503 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 ZNF627Q7L945 461 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 PXKQ7Z7A4 578 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 TSPEARQ8WU66 669 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 PIMREGQ9BSJ6 248 aa16.38■□□□□ 0.21
SPSB3-210ENST00000568416 TLN2Q9Y4G6 2542 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 LOC390937A0A1W2PQ73 354 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 ANGPT2O15123 496 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 CHP2O43745 196 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 LYPD3O95274 346 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 MT-ATP6P00846 226 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 NPR2P20594 1047 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 NPRL3Q12980 569 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 WDR88Q6ZMY6 472 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 C10orf53Q8N6V4 93 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 IL17RDQ8NFM7 739 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 OR4D11Q8NGI4 311 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 OR6T1Q8NGN1 323 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 OR5J2Q8NH18 312 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 ZNF75AQ96N20 296 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 KCNK17Q96T54 332 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 DOK1Q99704 481 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 KAT8Q9H7Z6 458 aaKnown RBP16.37■□□□□ 0.21
SPSB3-210ENST00000568416 B3GAT2Q9NPZ5 323 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 FBXO9Q9UK97 447 aaPredicted RBP16.37■□□□□ 0.21
SPSB3-210ENST00000568416 CDC42EP3Q9UKI2 254 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 TRIM33Q9UPN9 1127 aa16.37■□□□□ 0.21
SPSB3-210ENST00000568416 TMEM129A0AVI4 362 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 hCG_2039718K7EN88 272 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 EDF1O60869 148 aaKnown RBP16.36■□□□□ 0.21
SPSB3-210ENST00000568416 HLA-HP01893 362 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 THY1P04216 161 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 FAM157CP0CG43 387 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 CAPZA2P47755 286 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 GZMKP49863 264 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 CAMK2DQ13557 499 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 NFYCQ13952 458 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 GGTLC2Q14390 218 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 ENTPD8Q5MY95 495 aa16.36■□□□□ 0.21
SPSB3-210ENST00000568416 RBM45Q8IUH3 476 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms