RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 UTP23Q9BRU9 249 aaKnown RBP15.27■□□□□ 0.03
CMTM3-213ENST00000566756 ALG12Q9BV10 488 aa15.27■□□□□ 0.03
CMTM3-213ENST00000566756 SLITRK2Q9H156 845 aa15.27■□□□□ 0.03
CMTM3-213ENST00000566756 HEXA-AS1Q9H8Q6 139 aa15.27■□□□□ 0.03
CMTM3-213ENST00000566756 HRASLSQ9HDD0 168 aa15.27■□□□□ 0.03
CMTM3-213ENST00000566756 EXOSC3Q9NQT5 275 aaKnown RBP15.27■□□□□ 0.03
CMTM3-213ENST00000566756 DTX4Q9Y2E6 619 aa15.27■□□□□ 0.03
CMTM3-213ENST00000566756 LEUTXA8MZ59 168 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 HCRTR1O43613 425 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 KRT33AO76009 404 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 ZNF432O94892 652 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 CD14P08571 375 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 TDGF1P13385 188 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 DEFB133Q30KQ1 61 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 LINGO2Q7L985 606 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 FAM122BQ7Z309 247 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 LSRQ86X29 649 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-213ENST00000566756 OR6V1Q8N148 313 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 LRRC75AQ8NAA5 344 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 OR11H4Q8NGC9 324 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 OR6K6Q8NGW6 343 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 RNF166Q96A37 237 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-213ENST00000566756 S100A16Q96FQ6 103 aaKnown RBP15.26■□□□□ 0.03
CMTM3-213ENST00000566756 CITED4Q96RK1 184 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 AUNIPQ9H7T9 357 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 LRIT1Q9P2V4 623 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 PRODH2Q9UF12 536 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 CLDN16Q9Y5I7 305 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 PI4KAP42356 2102 aa15.26■□□□□ 0.03
CMTM3-213ENST00000566756 IGKV1D-42A0A075B6H8 117 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ZFPL1O95159 310 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 NSA2O95478 260 aaKnown RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 PSMB10P40306 273 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 FNTBP49356 437 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 AP2S1P53680 142 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ERVK-25P63136 954 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ZNF267Q14586 743 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 Q499Y3 187 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 FNDC7Q5VTL7 733 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 NUP210LQ5VU65 1888 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ESPNLQ6ZVH7 1005 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 PRSS45Q7RTY3 260 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 FAM220AQ7Z4H9 259 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ZNF615Q8N8J6 731 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 BMPERQ8N8U9 685 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 OR11G2Q8NGC1 345 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 OR4C3Q8NH37 302 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 C16orf52Q8NHV5 167 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 FCAMRQ8WWV6 532 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 HAVCR1Q96D42 359 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 NXPE2Q96DL1 559 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 CHRNA10Q9GZZ6 450 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 OR10A5Q9H207 317 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 C12orf10Q9HB07 376 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 EPHA6Q9UF33 1036 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 OR10H1Q9Y4A9 318 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 PCDH15Q96QU1 1955 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 A0A0A6YYC8 382 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 TRBV5-5A0A0J9YX44 114 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ELOA3DA6NLF2 546 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 I3L1I5 382 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 HRKO00198 91 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 SSNA1O43805 119 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 DNASE1P24855 282 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 SDHAP31040 664 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 MECP2P51608 486 aaKnown RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 HSD17B7P56937 341 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 NANOS3P60323 173 aaKnown RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ZNF74Q16587 644 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ELOA3BQ3SY89 546 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 RNASE12Q5GAN4 147 aaKnown RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 LYSMD4Q5XG99 296 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 PWWP2BQ6NUJ5 590 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 LEG1Q6P5S2 330 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 TSSK4Q6SA08 328 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 LRRN1Q6UXK5 716 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 DNM1P46Q6ZS02 220 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ATG4DQ86TL0 474 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 JAZF1Q86VZ6 243 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 CCDC28AQ8IWP9 274 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 TIGD4Q8IY51 512 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ELOA3Q8NG57 546 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 RGP1Q92546 391 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 THRSPQ92748 146 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 RASD2Q96D21 266 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 TCTN2Q96GX1 697 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 MAP6Q96JE9 813 aa15.25■□□□□ 0.03
CMTM3-213ENST00000566756 ZNF436Q9C0F3 470 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-213ENST00000566756 CABIN1Q9Y6J0 2220 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 ANKRD20A5PA0PJZ0 165 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 GNB5O14775 395 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 SHOXO15266 292 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 SDC3O75056 442 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 PDGFBP01127 241 aaPredicted RBP15.24■□□□□ 0.03
CMTM3-213ENST00000566756 IFNA7P01567 189 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 CPN1P15169 458 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 PTH2RP49190 550 aa15.24■□□□□ 0.03
CMTM3-213ENST00000566756 ALKBH1Q13686 389 aaKnown RBP15.24■□□□□ 0.03
CMTM3-213ENST00000566756 HES5Q5TA89 166 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms