RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
FANCA-220ENST00000566409 LOC100653049A0A140TA62 436 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 MRASO14807 208 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 SSX4O60224 188 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 KRT34O76011 436 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 IGLV1-44P01699 117 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 VIMP08670 466 aaKnown RBP12.75□□□□□ -0.37
FANCA-220ENST00000566409 CELA3BP08861 270 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 NQO1P15559 274 aaKnown RBP12.75□□□□□ -0.37
FANCA-220ENST00000566409 SH3BGRP55822 239 aaPredicted RBP12.75□□□□□ -0.37
FANCA-220ENST00000566409 IL1RL1Q01638 556 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 PUDPQ08623 228 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 CHD3Q12873 2000 aaKnown RBP12.75□□□□□ -0.37
FANCA-220ENST00000566409 PMS2P3Q13401 168 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 CARD17Q5XLA6 110 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 RTTNQ86VV8 2226 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 SNX32Q86XE0 403 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 FBXL14Q8N1E6 418 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 GPR137CQ8N3F9 429 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 LRRC17Q8N6Y2 441 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 PIK3C3Q8NEB9 887 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 OR8J3Q8NGG0 315 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 HS6ST2Q96MM7 605 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 ZNF317Q96PQ6 595 aaPredicted RBP12.75□□□□□ -0.37
FANCA-220ENST00000566409 PRSS27Q9BQR3 290 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 ZNF426Q9BUY5 554 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 ASPNQ9BXN1 380 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 CCDC134Q9H6E4 229 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 FKRPQ9H9S5 495 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 TAS2R5Q9NYW4 299 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
FANCA-220ENST00000566409 TRAPPC13A5PLN9 417 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 M0R3G1 203 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 SEC14L2O76054 403 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 IGKV3-15P01624 115 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 CECR9P0C854 216 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
FANCA-220ENST00000566409 TNFRSF1BP20333 461 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 CALCRP30988 508 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 APOBEC3AP31941 199 aaPredicted RBP12.74□□□□□ -0.37
FANCA-220ENST00000566409 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
FANCA-220ENST00000566409 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
FANCA-220ENST00000566409 ZNF74Q16587 644 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 INTS11Q5TA45 600 aaKnown RBP12.74□□□□□ -0.37
FANCA-220ENST00000566409 PXKQ7Z7A4 578 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 C10orf53Q8N6V4 93 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 OR5J2Q8NH18 312 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 C10orf82Q8WW14 230 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 MEPEQ9NQ76 525 aaPredicted RBP12.74□□□□□ -0.37
FANCA-220ENST00000566409 SLC7A7Q9UM01 511 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 NOX1Q9Y5S8 564 aa12.74□□□□□ -0.37
FANCA-220ENST00000566409 CUBNO60494 3623 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 IGHV4-30-2A0A087WSY4 118 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 A0A096LNT2 108 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 H7C417 338 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 CH25HO95992 272 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 MT-ATP6P00846 226 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 NPPAP01160 153 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 CBR1P16152 277 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 PCSK6P29122 969 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 NAAAQ02083 359 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 HGFACQ04756 655 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 CAMK2DQ13557 499 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 C3orf36Q3SXR2 165 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 MMEL1Q495T6 779 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 OR10H5Q8NGA6 315 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 SLC26A7Q8TE54 656 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 LRR1Q96L50 414 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 ADAD1Q96M93 576 aaKnown RBP12.73□□□□□ -0.37
FANCA-220ENST00000566409 SH3GL1Q99961 368 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 ECSITQ9BQ95 431 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 BARX1Q9HBU1 254 aaPredicted RBP12.73□□□□□ -0.37
FANCA-220ENST00000566409 B3GNT2Q9NY97 397 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 ARMCX1Q9P291 453 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 GMPR2Q9P2T1 348 aaKnown RBP12.73□□□□□ -0.37
FANCA-220ENST00000566409 SH3GLB1Q9Y371 365 aa12.73□□□□□ -0.37
FANCA-220ENST00000566409 BBIP1A8MTZ0 92 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 ZNF99A8MXY4 864 aaPredicted RBP12.72□□□□□ -0.37
FANCA-220ENST00000566409 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 KPNA4O00629 521 aaPredicted RBP12.72□□□□□ -0.37
FANCA-220ENST00000566409 SHOX2O60902 331 aaPredicted RBP12.72□□□□□ -0.37
FANCA-220ENST00000566409 SERPINI2O75830 405 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 LY6HO94772 140 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 ADORA3P0DMS8 318 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 IFNGR1P15260 489 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 AHCYP23526 432 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 RAB35Q15286 201 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 TTC33Q6PID6 262 aaPredicted RBP12.72□□□□□ -0.37
FANCA-220ENST00000566409 ZNF627Q7L945 461 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 MDP1Q86V88 176 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 CARM1Q86X55 608 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 NKAIN4Q8IVV8 208 aa12.72□□□□□ -0.37
FANCA-220ENST00000566409 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms