RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 UGT2B15P54855 530 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 LSM11P83369 360 aaKnown RBP eCLIP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 AQP6Q13520 282 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 KRR1Q13601 381 aaKnown RBP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 SPCS2Q15005 226 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 OXA1LQ15070 435 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 SEC23BQ15437 767 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 ACSF3Q4G176 576 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 FAM69AQ5T7M9 428 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 MYO7BQ6PIF6 2116 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 TMPRSS11FQ6ZWK6 438 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 CHMP1BQ7LBR1 199 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 IGFN1Q86VF2 1251 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 LSRQ86X29 649 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF540Q8NDQ6 660 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 OR52J3Q8NH60 311 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 RNF217Q8TC41 542 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 SMPDL3BQ92485 455 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 WNT2BQ93097 391 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 ALPK1Q96QP1 1244 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 DMRTA2Q96SC8 542 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 TTYH2Q9BSA4 534 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 MMP27Q9H306 513 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 SIAEQ9HAT2 523 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 C20orf141Q9NUB4 165 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 ALKBH4Q9NXW9 302 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 CNOT2Q9NZN8 540 aaKnown RBP11.28□□□□□ -0.6
SF3B3-206ENST00000565990 OSGIN2Q9Y236 505 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 MED31Q9Y3C7 131 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF175Q9Y473 711 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 UGT2A1Q9Y4X1 527 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 NBASA2RRP1 2371 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
SF3B3-206ENST00000565990 LOC102725191A0A1B0GVB3 256 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 FUOMA2VDF0 154 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 KDM4EB2RXH2 506 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 PTGES3LE9PB15 166 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 EIF1BO60739 113 aaKnown RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 TOXO94900 526 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 INMTO95050 263 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 RCBTB2O95199 551 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 TGM6O95932 706 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 TSPAN19P0C672 248 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 ASAH2BP0C7U1 165 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 GLI4P10075 376 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 ENPP1P22413 925 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 PRKACGP22612 351 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 CEACAM8P31997 349 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 P2RY4P51582 365 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 CASP6P55212 293 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 SPIBQ01892 262 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MFSD13AQ14CX5 517 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 SGCBQ16585 318 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF74Q16587 644 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 EIF2S3LQ2VIR3 472 aaKnown RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 C1orf185Q5T7R7 199 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 PAQR6Q6TCH4 344 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 KBTBD8Q8NFY9 601 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 OR6Q1Q8NGQ2 317 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 CNIH3Q8TBE1 160 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 MOGAT1Q96PD6 335 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 CCDC90BQ9GZT6 254 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 RNF122Q9H9V4 155 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 FANCFQ9NPI8 374 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
SF3B3-206ENST00000565990 PSORS1C1Q9UIG5 152 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 TINAGQ9UJW2 476 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 B3GALT5Q9Y2C3 310 aa11.27□□□□□ -0.61
SF3B3-206ENST00000565990 A0A1B0GUH1 482 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 SLC22A20A6NK97 555 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 MS4A18H0YCH9 400 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 TNFRSF11BO00300 401 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 SMAD9O15198 467 aaKnown RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 KLF4O43474 513 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 CYTIPO60759 359 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 AQP8O94778 261 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 AHSA1O95433 338 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 MT-ND2P03891 347 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 CDK1P06493 297 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 PIPP12273 146 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-206ENST00000565990 FUT1P19526 365 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 OPRL1P41146 370 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 OMPP47874 163 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 UQCRFS1P47985 274 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 PPP5CP53041 499 aa11.26□□□□□ -0.61
SF3B3-206ENST00000565990 OR2B6P58173 313 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms