RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SLC35F4A4IF30 521 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 ZNF726A6NNF4 738 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 KIAA1324LA8MWY0 1029 aaPredicted RBP15.37■□□□□ 0.05
NME3-205ENST00000563854 CHP2O43745 196 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 CD5LO43866 347 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 GPRIN2O60269 458 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 OR6A2O95222 327 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 ADORA3P0DMS8 318 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 TROVE2P10155 538 aaKnown RBP eCLIP15.37■□□□□ 0.05
NME3-205ENST00000563854 CALCRP30988 508 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 EFNA4P52798 201 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 CAMK2DQ13557 499 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 CARTPTQ16568 116 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 TRMT5Q32P41 509 aaKnown RBP15.37■□□□□ 0.05
NME3-205ENST00000563854 MMEL1Q495T6 779 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 PATL1Q86TB9 770 aaKnown RBP15.37■□□□□ 0.05
NME3-205ENST00000563854 SLC30A8Q8IWU4 369 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 OR10H5Q8NGA6 315 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 OR4D11Q8NGI4 311 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 OR6N1Q8NGY5 312 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 TSPEARQ8WU66 669 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 TAMM41Q96BW9 452 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 SLC41A3Q96GZ6 507 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 TXNDC15Q96J42 360 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 VRK1Q99986 396 aaPredicted RBP15.37■□□□□ 0.05
NME3-205ENST00000563854 ULBP2Q9BZM5 246 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 B3GAT2Q9NPZ5 323 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 MRPL39Q9NYK5 338 aaKnown RBP15.37■□□□□ 0.05
NME3-205ENST00000563854 CRNNQ9UBG3 495 aaPredicted RBP15.37■□□□□ 0.05
NME3-205ENST00000563854 NOX1Q9Y5S8 564 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 FKBP7Q9Y680 259 aa15.37■□□□□ 0.05
NME3-205ENST00000563854 LOC102725191A0A1B0GVB3 256 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 ZNF503-AS2A6NEH8 195 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 ZNF99A8MXY4 864 aaPredicted RBP15.36■□□□□ 0.05
NME3-205ENST00000563854 FBP2O00757 339 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 PLPP3O14495 311 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 FMO6PO60774 539 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 CRLF1O75462 422 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 IGLV1-44P01699 117 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 OR4A8P0C604 315 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 CD79AP11912 226 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 HOXB1P14653 301 aaPredicted RBP15.36■□□□□ 0.05
NME3-205ENST00000563854 CD247P20963 164 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 PAX7P23759 505 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 SERPINF1P36955 418 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 CYLC2Q14093 348 aaPredicted RBP15.36■□□□□ 0.05
NME3-205ENST00000563854 MST1LQ2TV78 715 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 RABL3Q5HYI8 236 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 INTS11Q5TA45 600 aaKnown RBP15.36■□□□□ 0.05
NME3-205ENST00000563854 METTL21CQ5VZV1 264 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 TTC33Q6PID6 262 aaPredicted RBP15.36■□□□□ 0.05
NME3-205ENST00000563854 WDR88Q6ZMY6 472 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 MDP1Q86V88 176 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 C20orf196Q8IYI0 205 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 ANKS4BQ8N8V4 417 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 OR5J2Q8NH18 312 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 ADAMTS16Q8TE57 1224 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 SORCS2Q96PQ0 1159 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 MOV10Q9HCE1 1003 aaKnown RBP15.36■□□□□ 0.05
NME3-205ENST00000563854 ADAM21Q9UKJ8 722 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 SLC7A7Q9UM01 511 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 POFUT2Q9Y2G5 429 aa15.36■□□□□ 0.05
NME3-205ENST00000563854 CH25HO95992 272 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 MT-ATP6P00846 226 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 IGKV3-15P01624 115 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 HLA-HP01893 362 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 C8BP07358 591 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 UMPSP11172 480 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 CBR1P16152 277 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 SLC25A16P16260 332 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 BIDP55957 195 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 ADIPOQQ15848 244 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 SWI5Q1ZZU3 235 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 VMACQ2NL98 169 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 NANOGP8Q6NSW7 305 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 ZNF813Q6ZN06 617 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 WDFY1Q8IWB7 410 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 OR4F15Q8NGB8 312 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 C10orf105Q8TEF2 133 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 NANOS1Q8WY41 292 aaKnown RBP15.35■□□□□ 0.05
NME3-205ENST00000563854 NANOGQ9H9S0 305 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 FGFR1OP2Q9NVK5 253 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 USP22Q9UPT9 525 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 DNHD1Q96M86 4753 aa15.35■□□□□ 0.05
NME3-205ENST00000563854 JMJD1CQ15652 2540 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 TRAPPC13A5PLN9 417 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 MRASO14807 208 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 TLX2O43763 284 aaPredicted RBP15.34■□□□□ 0.05
NME3-205ENST00000563854 THY1P04216 161 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 VIMP08670 466 aaKnown RBP15.34■□□□□ 0.05
NME3-205ENST00000563854 CSF3P09919 207 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 B4GALT1P15291 398 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 TNFRSF1BP20333 461 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 ARR3P36575 388 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 CSNK1A1P48729 337 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 ARFIP2P53365 341 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 PIGFQ07326 219 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 TMEM249Q2WGJ8 235 aa15.34■□□□□ 0.05
NME3-205ENST00000563854 C3orf36Q3SXR2 165 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms