RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TCRBV9S1A1TA0A576 114 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 J3QL48 77 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 OR7A17O14581 309 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 DNPH1O43598 174 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 CHST1O43916 411 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 UGDHO60701 494 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 SKAP2O75563 359 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 KRT33AO76009 404 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 LIPFP07098 398 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 ADH4P08319 380 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 HCKP08631 526 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 INAFM2P0DMQ5 153 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 STMN1P16949 149 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 FSTP19883 344 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 GTF2E2P29084 291 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 SSTR1P30872 391 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 H3F3AP84243 136 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 GALNT1Q10472 559 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 TOMM34Q15785 309 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 NPTX1Q15818 432 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 LY6EQ16553 131 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 CPSF6Q16630 551 aaKnown RBP eCLIP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 GLE1Q53GS7 698 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 METTL11BQ5VVY1 283 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 FAM180BQ6P0A1 224 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 LINGO2Q7L985 606 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 LRRC8AQ8IWT6 810 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 OR51D1Q8NGF3 324 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 STAG3L4Q8TBR4 150 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 C10orf82Q8WW14 230 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 GEMIN6Q8WXD5 167 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 MYDGFQ969H8 173 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 NEIL1Q96FI4 390 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 AJUBAQ96IF1 538 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF75AQ96N20 296 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 ALKBH3Q96Q83 286 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 OR5M11Q96RB7 305 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 SIGLEC11Q96RL6 698 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 CPNE1Q99829 537 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 MRPL1Q9BYD6 325 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 MUC2Q02817 5179 aa8.58□□□□□ -1.04
HDGFL3-204ENST00000563790 A0A096LPK6 155 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 ETV2O00321 342 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 FBP2O00757 339 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 RAD51CO43502 376 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SYNGR1O43759 233 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 PLOD3O60568 738 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 NUDT14O95848 222 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 IGKV1D-16P01601 117 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 LTA4HP09960 611 aaKnown RBP8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 PITPNBP48739 271 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 MFGE8Q08431 387 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 ILF2Q12905 390 aaKnown RBP8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SLC17A1Q14916 467 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 MOGQ16653 247 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SPRNQ5BIV9 151 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 TEX35Q5T0J7 233 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 IL23RQ5VWK5 629 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 PRAMEF8Q5VWM4 474 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 PRAMEF7Q5VXH5 474 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SLC27A4Q6P1M0 643 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 TMEM65Q6PI78 240 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 GOLGA7Q7Z5G4 137 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 PDZD9Q8IXQ8 264 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 CCDC36Q8IYA8 594 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SLC35F6Q8N357 371 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 METTL4Q8N3J2 472 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 RHEBL1Q8TAI7 183 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 MGARPQ8TDB4 240 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF524Q96C55 264 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 TSPAN17Q96FV3 270 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 ASPNQ9BXN1 380 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 Q9N2J8 555 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 B3GNT2Q9NY97 397 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SCOCQ9UIL1 159 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 ACOT9Q9Y305 439 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 GPR45Q9Y5Y3 372 aa8.57□□□□□ -1.04
HDGFL3-204ENST00000563790 SUPT3HB4E1H0 165 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 PHYHO14832 338 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 SPRY3O43610 288 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 SUPT3HO75486 399 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 ESRRBO95718 433 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 PMS2P2O95744 297 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 KLK1P06870 262 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 FASP25445 335 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 SLC12A2P55011 1212 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 ZNF117Q03924 483 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 SLC29A2Q14542 456 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 SYT14P1Q58G82 188 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 AAED1Q7RTV5 226 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 COMMD6Q7Z4G1 85 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 CREG2Q8IUH2 290 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 ZIC4Q8N9L1 334 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 TRPC4APQ8TEL6 797 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 ARL8AQ96BM9 186 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 TM4SF18Q96CE8 201 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 KLHL29Q96CT2 875 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 SERPINI1Q99574 410 aa8.56□□□□□ -1.04
HDGFL3-204ENST00000563790 IPPKQ9H8X2 491 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms