RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PRPF19Q9UMS4 504 aaKnown RBP7.51□□□□□ -1.21
UBR1-204ENST00000563239 MED31Q9Y3C7 131 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 NOX1Q9Y5S8 564 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 SPG11Q96JI7 2443 aa7.51□□□□□ -1.21
UBR1-204ENST00000563239 TRBV4-1A0A0J9YWV2 114 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 A0A1W2PRQ8 180 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 SLC35F4A4IF30 521 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 OR5H1A6NKK0 313 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 C11orf98E9PRG8 122 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 RPL36A-HNRNPH2H7BZ11 118 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 CASKO14936 926 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 GMNNO75496 209 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 RAD51DO75771 328 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 GOSR1O95249 250 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 ADORA3P0DMS8 318 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 IFI30P13284 250 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 IFNGR1P15260 489 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 ZNF26P17031 533 aaPredicted RBP7.5□□□□□ -1.21
UBR1-204ENST00000563239 AHCYP23526 432 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 MPGP29372 298 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 AQP2P41181 271 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 RPS4XP62701 263 aaKnown RBP7.5□□□□□ -1.21
UBR1-204ENST00000563239 RPL18Q07020 188 aaKnown RBP7.5□□□□□ -1.21
UBR1-204ENST00000563239 DGCR6Q14129 220 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 LAPTM4AQ15012 233 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 SEC23BQ15437 767 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 TIMM23BQ5SRD1 257 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 LCN8Q6JVE9 175 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 PODNL1Q6PEZ8 512 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 PIWIL3Q7Z3Z3 882 aaKnown RBP7.5□□□□□ -1.21
UBR1-204ENST00000563239 TMEM200AQ86VY9 491 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 WFDC8Q8IUA0 241 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 C20orf196Q8IYI0 205 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 RNF113BQ8IZP6 322 aaKnown RBP7.5□□□□□ -1.21
UBR1-204ENST00000563239 LRRC75AQ8NAA5 344 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 BPIFA2Q96DR5 249 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 ALKBH3Q96Q83 286 aaPredicted RBP7.5□□□□□ -1.21
UBR1-204ENST00000563239 PIP5K1AQ99755 562 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 TMEM204Q9BSN7 226 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 THTPAQ9BU02 230 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 NELFAQ9H3P2 528 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 ANKRD19PQ9H560 264 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 IL1RAPQ9NPH3 570 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 NPAP1Q9NZP6 1156 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 UPB1Q9UBR1 384 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 SLC25A15Q9Y619 301 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 ABCA4P78363 2273 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 CELSR1Q9NYQ6 3014 aa7.5□□□□□ -1.21
UBR1-204ENST00000563239 ALPK2Q86TB3 2170 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 A0A1W2PR80 420 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 HTR3EA5X5Y0 456 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 DPRXA6NFQ7 191 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 BLOC1S5-TXNDC5H3BN57 136 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 CDC42EP2O14613 210 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 SLC43A1O75387 559 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 SERPINI2O75830 405 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 PLAUP00749 431 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 HIST1H2ABP04908 130 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 F13BP05160 661 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 H1F0P07305 194 aaKnown RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 UMPSP11172 480 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 MAGEA2P43356 314 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 OMPP47874 163 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 LIMS1P48059 325 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 BIDP55957 195 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 IL1RL1Q01638 556 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 RUNX1T1Q06455 604 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 CAMK2DQ13557 499 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 PPA1Q15181 289 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 STK11Q15831 433 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 HIKESHIQ53FT3 197 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 CARD17Q5XLA6 110 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 ZNF730Q6ZMV8 503 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 TMPRSS11FQ6ZWK6 438 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 SLC35D2Q76EJ3 337 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 HIST3H2AQ7L7L0 130 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 NANOGNBQ7Z5D8 188 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 P2RY8Q86VZ1 359 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 CYP4Z1Q86W10 505 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 DHFR2Q86XF0 187 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 C1orf162Q8NEQ5 155 aaPredicted RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 ANKK1Q8NFD2 765 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 OR1K1Q8NGR3 316 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 OR6X1Q8NH79 312 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 LILRB1Q8NHL6 650 aaPredicted RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 BCL2L2Q92843 193 aaPredicted RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 HIST1H2ACQ93077 130 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 TMEM54Q969K7 222 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 ASB9Q96DX5 294 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 PIK3IP1Q96FE7 263 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 PLPPR2Q96GM1 343 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 LRR1Q96L50 414 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 TNFRSF13CQ96RJ3 184 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 SEPHS2Q99611 448 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 GPA33Q99795 319 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 USB1Q9BQ65 265 aaKnown RBP7.49□□□□□ -1.21
UBR1-204ENST00000563239 BTBD10Q9BSF8 475 aa7.49□□□□□ -1.21
UBR1-204ENST00000563239 CADM1Q9BY67 442 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms