RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR1S2Q8NGQ3 325 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ANKRD49Q8WVL7 239 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ARPC1AQ92747 370 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC38A4Q969I6 547 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 ITCHQ96J02 903 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 SORT1Q99523 831 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 RARRES2Q99969 163 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 EBF4Q9BQW3 602 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 PELOQ9BRX2 385 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 MTG1Q9BT17 334 aaPredicted RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 TUBG2Q9NRH3 451 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 MRPL22Q9NWU5 206 aaKnown RBP2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 VNN3Q9NY84 501 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 CD274Q9NZQ7 290 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 PSME2Q9UL46 239 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 MOKQ9UQ07 419 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 KIF25-AS1Q9Y6Z4 181 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 CNTNAP1P78357 1384 aa2.36□□□□□ -2.03
SHCBP1-202ENST00000563219 IGHV3OR16-13A0A075B7E8 117 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 IGHV7-81A0A0B4J1V7 117 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 A0A0J9YXY3 114 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 GOLGA6L7A0A1B0GV03 622 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 F6UB75 175 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 GOLGA8TH3BQL2 631 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 CCL21O00585 134 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TNFSF11O14788 317 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 LYPLA1O75608 230 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 CTAG2O75638 210 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TNFSF13O75888 250 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ERCC1P07992 297 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 GIPP09681 153 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 POLR2MP0CAP2 368 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF43P17038 809 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 PSMB1P20618 241 aaKnown RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 FMO3P31513 532 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 RFC4P35249 363 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 RORAP35398 523 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 PEX19P40855 299 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 SLC1A2P43004 574 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 CDKN1BP46527 198 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 UQCRFS1P47985 274 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 CSNK1EP49674 416 aaKnown RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 YWHAGP61981 247 aaKnown RBP eCLIP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 IL18Q14116 193 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 KYAT1Q16773 422 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 HADHQ16836 314 aaKnown RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 DGUOKQ16854 277 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 RNF212Q495C1 297 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 KLF17Q5JT82 389 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 GPR157Q5UAW9 335 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 C1orf146Q5VVC0 180 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 RSBN1Q5VWQ0 802 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TWF2Q6IBS0 349 aaKnown RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF544Q6NX49 715 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TMEM220Q6QAJ8 160 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 WDR74Q6RFH5 385 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 BIVMQ86UB2 503 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 C17orf82Q86X59 251 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TGIF2LYQ8IUE0 185 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 PIANPQ8IYJ0 282 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 CEND1Q8N111 149 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TRPV1Q8NER1 839 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 OR4A4PQ8NGN8 299 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ACMSDQ8TDX5 336 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 NRGNQ92686 78 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 SMARCD2Q92925 531 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 STMN2Q93045 179 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ECHDC3Q96DC8 303 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF414Q96IQ9 312 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ROGDIQ9GZN7 287 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 GBA3Q9H227 469 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 LY9Q9HBG7 655 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 RETNQ9HD89 108 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 FGF20Q9NP95 211 aaPredicted RBP2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 PLSCR3Q9NRY6 295 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 MARCH5Q9NX47 278 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 QPCTLQ9NXS2 382 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 TBC1D24Q9ULP9 559 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF318Q5VUA4 2279 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 SH3TC1Q8TE82 1336 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 THSD7BQ9C0I4 1608 aa2.35□□□□□ -2.03
SHCBP1-202ENST00000563219 CIB4A0PJX0 185 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 A8MU10 97 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 KLLNB2CW77 178 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 H0YIV9 168 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 ZNF780AO75290 641 aaPredicted RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 TIMP1P01033 207 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 IGHV3-48P01763 117 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 IGHV3-23P01764 117 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 KRT6AP02538 564 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 HSPB1P04792 205 aaKnown RBP2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 RALBP11234 206 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 CD1EP15812 388 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 COX7A1P24310 79 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 RRM2P31350 389 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 NSG1P42857 185 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 MAGEA1P43355 309 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 RFX3P48380 749 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 RORCP51449 518 aa2.34□□□□□ -2.03
SHCBP1-202ENST00000563219 CAV2P51636 162 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms