RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 IGHV1-18A0A0C4DH31 117 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 TRAPPC13A5PLN9 417 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 M0R3G1 203 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 HPRP00739 348 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 IFNA14P01570 189 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 GZMMP51124 257 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 DSCR9P59020 149 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 TUBA1BP68363 451 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 TUBA4AP68366 448 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 NPTX1Q15818 432 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 C3orf36Q3SXR2 165 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 RABL3Q5HYI8 236 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 CARD17Q5XLA6 110 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 REP15Q6BDI9 236 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 ERICH5Q6P6B1 374 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 TUBA1AQ71U36 451 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 PXKQ7Z7A4 578 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 SNX32Q86XE0 403 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 FAM169BQ8N8A8 192 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 OR5J2Q8NH18 312 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 ADAMTS16Q8TE57 1224 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 MPP4Q96JB8 637 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 LRR1Q96L50 414 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 MOGAT1Q96PD6 335 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 KATNB1Q9BVA0 655 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 BAG5Q9UL15 447 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 JMJD1CQ15652 2540 aa14.69□□□□□ -0.06
CLK3-210ENST00000563112 FN1P02751 2386 aaKnown RBP14.69□□□□□ -0.06
CLK3-210ENST00000563112 LOC100653049A0A140TA62 436 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 SLC35F4A4IF30 521 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 LRRN3E7EW58 273 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 PLPP3O14495 311 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 KRT34O76011 436 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 ADORA3P0DMS8 318 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 HLA-DOBP13765 273 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 CAPZA2P47755 286 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 RBM45Q8IUH3 476 aaKnown RBP14.68□□□□□ -0.06
CLK3-210ENST00000563112 C20orf196Q8IYI0 205 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 TMEM123Q8N131 208 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 OR6N1Q8NGY5 312 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 EMC6Q9BV81 110 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 ZNF446Q9NWS9 450 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 MED29Q9NX70 200 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 CRNNQ9UBG3 495 aaPredicted RBP14.68□□□□□ -0.06
CLK3-210ENST00000563112 SLC7A7Q9UM01 511 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 CAPN7Q9Y6W3 813 aa14.68□□□□□ -0.06
CLK3-210ENST00000563112 VSTM5A8MXK1 200 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 ZNF99A8MXY4 864 aaPredicted RBP14.67□□□□□ -0.06
CLK3-210ENST00000563112 H7C417 338 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 SERPINI2O75830 405 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 CH25HO95992 272 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 TP53P04637 393 aaPredicted RBP14.67□□□□□ -0.06
CLK3-210ENST00000563112 HIST1H2ABP04908 130 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 CBR1P16152 277 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 PCSK6P29122 969 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 ARR3P36575 388 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 NAAAQ02083 359 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 GUCY1A3Q02108 690 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 CGB2Q6NT52 195 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 CLEC2AQ6UVW9 174 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 DNM1P46Q6ZS02 220 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 HIST3H2AQ7L7L0 130 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 CALHM3Q86XJ0 350 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 OR4F15Q8NGB8 312 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 OR4D11Q8NGI4 311 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 HIST1H2ACQ93077 130 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 FBXO17Q96EF6 278 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 TXNDC15Q96J42 360 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 SLC19A3Q9BZV2 496 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 PCDHAC1Q9H158 963 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 NELFAQ9H3P2 528 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 NANSQ9NR45 359 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 USP22Q9UPT9 525 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 POFUT2Q9Y2G5 429 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 SH3GLB1Q9Y371 365 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 ABCA2Q9BZC7 2435 aa14.67□□□□□ -0.06
CLK3-210ENST00000563112 C11orf98E9PRG8 122 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 FXYD1O00168 92 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 SLC22A2O15244 555 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 IGKV3-15P01624 115 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 IGLV1-44P01699 117 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 CECR9P0C854 216 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 UMPSP11172 480 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 SNRPD2P62316 118 aaKnown RBP14.66□□□□□ -0.06
CLK3-210ENST00000563112 CAMK2DQ13557 499 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 ZNF74Q16587 644 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 CARM1Q86X55 608 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 MAPK1IP1LQ8NDC0 245 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 IL17RDQ8NFM7 739 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 C10orf82Q8WW14 230 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 ZNF837Q96EG3 531 aaPredicted RBP14.66□□□□□ -0.06
CLK3-210ENST00000563112 ULBP2Q9BZM5 246 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 POLR2J2Q9GZM3 115 aaKnown RBP14.66□□□□□ -0.06
CLK3-210ENST00000563112 POLR2J3Q9H1A7 115 aaKnown RBP14.66□□□□□ -0.06
CLK3-210ENST00000563112 CCDC134Q9H6E4 229 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 MED4Q9NPJ6 270 aa14.66□□□□□ -0.06
CLK3-210ENST00000563112 KPNA4O00629 521 aaPredicted RBP14.65□□□□□ -0.06
CLK3-210ENST00000563112 LYPD3O95274 346 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 THY1P04216 161 aa14.65□□□□□ -0.06
CLK3-210ENST00000563112 SERPINF1P36955 418 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms