RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 IMMTQ16891 758 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 ZNF630Q2M218 657 aaPredicted RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 PARP15Q460N3 678 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 C1orf100Q5SVJ3 147 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 PRAMEF5Q5TYX0 476 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 PRAMEF6Q5VXH4 476 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 Q6ZN92 141 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 C19orf35Q6ZS72 473 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 ZNF571Q7Z3V5 609 aaPredicted RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 ERI1Q8IV48 349 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 POLR2J2Q9GZM3 115 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 POLR2J3Q9H1A7 115 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 SH2D2AQ9NP31 389 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 AIG1Q9NVV5 245 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 NAP1L2Q9ULW6 460 aaPredicted RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 NPTNQ9Y639 398 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 MBD5Q9P267 1494 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 SYCP2Q9BX26 1530 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 INO80Q9ULG1 1556 aaPredicted RBP4.36□□□□□ -1.71
SMG1-204ENST00000561940 UBR1Q8IWV7 1749 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 CDC42BPBQ9Y5S2 1711 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 SUPT7LO94864 414 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 SNAPINO95295 136 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 CD1CP29017 333 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 MICBQ29980 383 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 EOGTQ5NDL2 527 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 C11orf71Q6IPW1 123 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 C1orf94Q6P1W5 598 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 GDPD3Q7L5L3 318 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 TGIF2LXQ8IUE1 241 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 SETD7Q8WTS6 366 aaKnown RBP4.36□□□□□ -1.71
SMG1-204ENST00000561940 TUBGCP3Q96CW5 907 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 SELENOIQ9C0D9 397 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 NARFLQ9H6Q4 476 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 PISDQ9UG56 409 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 MMP17Q9ULZ9 603 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 LRPPRCP42704 1394 aaKnown RBP4.36□□□□□ -1.71
SMG1-204ENST00000561940 CCNB3Q8WWL7 1395 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 EFCAB6Q5THR3 1501 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 GLI3P10071 1580 aa4.36□□□□□ -1.71
SMG1-204ENST00000561940 ADGBQ8N7X0 1667 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 IGLV3-22A0A075B6J6 115 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 PSMB11A5LHX3 300 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 OR5B21A6NL26 309 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 E9PBE3 544 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 GOLGA8SH3BPF8 625 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 EMC8O43402 210 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 MMP1P03956 469 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 KLK3P07288 261 aaPredicted RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 RPS2P15880 293 aaKnown RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 HNRNPH3P31942 346 aaKnown RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 EPS15P42566 896 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 VDAC2P45880 294 aaPredicted RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 GNB2P62879 340 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 PPIL2Q13356 520 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 KDM7AQ6ZMT4 941 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 FAM228AQ86W67 206 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 EGFL6Q8IUX8 553 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 NUDCD3Q8IVD9 361 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 TPRX1Q8N7U7 411 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 NKAPP1Q8N9T2 125 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 TRPV1Q8NER1 839 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 OR9K2Q8NGE7 335 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 OR51S1Q8NGJ8 323 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 OR9G1Q8NH87 305 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 FRAT1Q92837 279 aaPredicted RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 ITCHQ96J02 903 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 PLEKHA8Q96JA3 519 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 KCNA7Q96RP8 456 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 CNN2Q99439 309 aaKnown RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 P2RY13Q9BPV8 354 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 ETNK2Q9NVF9 386 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 KANK1Q14678 1352 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 C1orf167Q5SNV9 1468 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 PREX2Q70Z35 1606 aa4.35□□□□□ -1.71
SMG1-204ENST00000561940 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.35□□□□□ -1.71
SMG1-204ENST00000561940 P04436 131 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 DUX4L4P0CJ87 422 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 SLC2A3P11169 496 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 CD1BP29016 333 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 IL12AP29459 219 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 GDI1P31150 447 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 KIR2DS4P43632 304 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 ENPEPQ07075 957 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 SCRN3Q0VDG4 424 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 MRPL28Q13084 256 aaKnown RBP4.34□□□□□ -1.71
SMG1-204ENST00000561940 CCDC14Q49A88 953 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 LRRC31Q6UY01 552 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 UTS2BQ765I0 119 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 RUFY3Q7L099 469 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 TAS2R42Q7RTR8 314 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 PSTKQ8IV42 348 aaKnown RBP4.34□□□□□ -1.71
SMG1-204ENST00000561940 NECAB1Q8N987 351 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 OR2L5Q8NG80 312 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 OR2L3Q8NG85 312 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 OR10G3Q8NGC4 313 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 NEIL3Q8TAT5 605 aa4.34□□□□□ -1.71
SMG1-204ENST00000561940 FAM151AQ8WW52 585 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms