RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TMEM123Q8N131 208 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 C10orf53Q8N6V4 93 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 ZNF525Q8N782 197 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 FAM169BQ8N8A8 192 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 SCAIQ8N9R8 606 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 PIK3C3Q8NEB9 887 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 OR4D11Q8NGI4 311 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 FBXO17Q96EF6 278 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 TXNDC15Q96J42 360 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 KCNS3Q9BQ31 491 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 TMEM43Q9BTV4 400 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 EMC6Q9BV81 110 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 KATNB1Q9BVA0 655 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 TMEM120AQ9BXJ8 343 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 ASPNQ9BXN1 380 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 SEC61A2Q9H9S3 476 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 MRPL39Q9NYK5 338 aaKnown RBP8.95□□□□□ -0.98
CLK3-205ENST00000561673 PMF1-BGLAPU3KQ54 211 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
CLK3-205ENST00000561673 JMJD1CQ15652 2540 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 A0A096LNT2 108 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 SLC35F4A4IF30 521 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CPSF4LA6NMK7 179 aaKnown RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 KIAA1324LA8MWY0 1029 aaPredicted RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 ZNF99A8MXY4 864 aaPredicted RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 M0R3G1 203 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CHP2O43745 196 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 GPRIN2O60269 458 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 LY6HO94772 140 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 LYPD3O95274 346 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 IGKV3-15P01624 115 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CRYAAP02489 173 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 TP53P04637 393 aaPredicted RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 CELA3BP08861 270 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CBR1P16152 277 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CD247P20963 164 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 AHCYP23526 432 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 PCGF2P35227 344 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 SERPINF1P36955 418 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 EFNA4P52798 201 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CRYBA2P53672 197 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 POU3F1Q03052 451 aaPredicted RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 PUDPQ08623 228 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 SF3A3Q12874 501 aaKnown RBP eCLIP8.94□□□□□ -0.98
CLK3-205ENST00000561673 ENTPD8Q5MY95 495 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 NANOGP8Q6NSW7 305 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CLEC2AQ6UVW9 174 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 WDR88Q6ZMY6 472 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 PXKQ7Z7A4 578 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 PATL1Q86TB9 770 aaKnown RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 MYPOPQ86VE0 399 aaPredicted RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 TSPYL5Q86VY4 417 aaPredicted RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 SLC30A8Q8IWU4 369 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 ADAMTS16Q8TE57 1224 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 NANOS1Q8WY41 292 aaKnown RBP8.94□□□□□ -0.98
CLK3-205ENST00000561673 TAMM41Q96BW9 452 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 LRR1Q96L50 414 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 NANOGQ9H9S0 305 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 CA10Q9NS85 328 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 MED29Q9NX70 200 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 ADAM21Q9UKJ8 722 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 NOX1Q9Y5S8 564 aa8.94□□□□□ -0.98
CLK3-205ENST00000561673 PLCE1Q9P212 2302 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 AKAP8O43823 692 aaKnown RBP8.93□□□□□ -0.98
CLK3-205ENST00000561673 CD5LO43866 347 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 CRLF1O75462 422 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 SEC14L2O76054 403 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 MT-ATP6P00846 226 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 OR4A8P0C604 315 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 HGFACQ04756 655 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 CAMK2DQ13557 499 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 CYLC2Q14093 348 aaPredicted RBP8.93□□□□□ -0.98
CLK3-205ENST00000561673 ADIPOQQ15848 244 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 VMACQ2NL98 169 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 TRMT5Q32P41 509 aaKnown RBP8.93□□□□□ -0.98
CLK3-205ENST00000561673 RABL3Q5HYI8 236 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 VHLLQ6RSH7 139 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 CCDC80Q76M96 950 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 MDP1Q86V88 176 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 CALHM3Q86XJ0 350 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 CCDC36Q8IYA8 594 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 OR5J2Q8NH18 312 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 VANGL1Q8TAA9 524 aaPredicted RBP8.93□□□□□ -0.98
CLK3-205ENST00000561673 SLC26A7Q8TE54 656 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 FAM168AQ92567 244 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 LRRC58Q96CX6 371 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 MOV10Q9HCE1 1003 aaKnown RBP8.93□□□□□ -0.98
CLK3-205ENST00000561673 B3GNT2Q9NY97 397 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 SLC7A7Q9UM01 511 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 ALPK2Q86TB3 2170 aa8.93□□□□□ -0.98
CLK3-205ENST00000561673 IGHV2OR16-5A0A0B4J2B6 119 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 TRAPPC13A5PLN9 417 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 ZNF726A6NNF4 738 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 B9A039 149 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 C11orf98E9PRG8 122 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 FXYD1O00168 92 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 TLX2O43763 284 aaPredicted RBP8.92□□□□□ -0.98
CLK3-205ENST00000561673 SERPINI2O75830 405 aa8.92□□□□□ -0.98
CLK3-205ENST00000561673 CH25HO95992 272 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms