RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ABHD13Q7L211 337 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 LUZP2Q86TE4 346 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 IFNEQ86WN2 208 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CALHM3Q86XJ0 350 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 DCUN1D3Q8IWE4 304 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RIMKLAQ8IXN7 391 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZDHHC23Q8IYP9 409 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MICU2Q8IYU8 434 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SAMD14Q8IZD0 417 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 CADM3Q8N126 398 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 DHRSXQ8N5I4 330 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 POGLUT1Q8NBL1 392 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 C7orf57Q8NEG2 295 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZNF555Q8NEP9 628 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 OR7G3Q8NG95 312 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 OR4N2Q8NGD1 307 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 OR2T11Q8NH01 316 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MPLKIPQ8TAP9 179 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 HMGCLL1Q8TB92 370 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 WDR20Q8TBZ3 569 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 CANT1Q8WVQ1 401 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SLC5A11Q8WWX8 675 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 LZICQ8WZA0 190 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SMPDL3AQ92484 453 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TFGQ92734 400 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 FAM162AQ96A26 154 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ESAMQ96AP7 390 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SLCO4A1Q96BD0 722 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SLC22A18Q96BI1 424 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RNF183Q96D59 192 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 FAM120BQ96EK7 910 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 C11orf24Q96F05 449 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZC3HAV1LQ96H79 300 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 PYURFQ96I23 114 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 IMMP1LQ96LU5 166 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZNF583Q96ND8 569 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PANX1Q96RD7 426 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PKP4Q99569 1192 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TSC22D3Q99576 134 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RBM4BQ9BQ04 359 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 AIF1LQ9BQI0 150 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 TIMM29Q9BSF4 260 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 C1orf50Q9BV19 199 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RBM4Q9BWF3 364 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 RBM24Q9BX46 236 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ANKRD60Q9BZ19 345 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ACPTQ9BZG2 426 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 NPFFR1Q9GZQ6 430 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 RHBGQ9H310 441 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SRMSQ9H3Y6 488 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 REEP4Q9H6H4 257 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 EXO5Q9H790 373 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 MVB12BQ9H7P6 319 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 KAT8Q9H7Z6 458 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 PELI2Q9HAT8 420 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SIRT3Q9NTG7 399 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 DCAF13Q9NV06 445 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 DDX18Q9NVP1 670 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ADPRHL2Q9NX46 363 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PPP1R14DQ9NXH3 145 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 SMPD3Q9NY59 655 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 KIAA1456Q9P272 454 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 STOX2Q9P2F5 926 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 AASSQ9UDR5 926 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZNF282Q9UDV7 671 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZNF629Q9UEG4 869 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 ATP6V1HQ9UI12 483 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 ZNF639Q9UID6 485 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 NXT1Q9UKK6 140 aaKnown RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 BLOC1S6Q9UL45 172 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 POLR3HQ9Y535 204 aaPredicted RBP2.84□□□□□ -1.95
SPG11-225ENST00000561391 CLDN16Q9Y5I7 305 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 LIPGQ9Y5X9 500 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 PTGDR2Q9Y5Y4 395 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 AP4B1Q9Y6B7 739 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 COMMD3-BMI1R4GMX3 469 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 HSPE1-MOB4S4R3N1 261 aa2.84□□□□□ -1.95
SPG11-225ENST00000561391 HERC2O95714 4834 aa2.84□□□□□ -1.96
SPG11-225ENST00000561391 TENM2Q9NT68 2774 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 DOCK4Q8N1I0 1966 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 MALRD1Q5VYJ5 2156 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF407Q9C0G0 2248 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 KCNE1BA0A087WTH5 132 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 A0A096LNT2 108 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 RPS10-NUDT3A0A1W2PQS6 291 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 H3BNH8 94 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 SCAMP2O15127 329 aaKnown RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 PCDH7O60245 1069 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TBX19O60806 448 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 UGT2B11O75310 529 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 E2F6O75461 281 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 SERPINB7O75635 380 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 TIPRLO75663 272 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 IGKV2-30P06310 120 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 UBTFL6P0CB48 400 aaPredicted RBP2.83□□□□□ -1.96
SPG11-225ENST00000561391 PCNAP12004 261 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 SDC1P18827 310 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 EPORP19235 508 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ATP6V1B2P21281 511 aa2.83□□□□□ -1.96
SPG11-225ENST00000561391 ZNF10P21506 573 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms