RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 RNF217Q8TC41 542 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 FOXN4Q96NZ1 517 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 RABEP2Q9H5N1 569 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 ZNF442Q9H7R0 627 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 MYOZ1Q9NP98 299 aaPredicted RBP14.07□□□□□ -0.16
SNX1-213ENST00000561026 SLC13A4Q9UKG4 626 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 LOC390937A0A1W2PQ73 354 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 VSTM5A8MXK1 200 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 M0R3G1 203 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 MFN2O95140 757 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 BGLAPP02818 100 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 IDH3GP51553 393 aaPredicted RBP14.06□□□□□ -0.16
SNX1-213ENST00000561026 CDH12P55289 794 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 RUNDC3AQ59EK9 446 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 PHYHD1Q5SRE7 291 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 NHLRC1Q6VVB1 395 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 C20orf196Q8IYI0 205 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 IL17RDQ8NFM7 739 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 LRR1Q96L50 414 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 CPPED1Q9BRF8 314 aaPredicted RBP14.06□□□□□ -0.16
SNX1-213ENST00000561026 PIMREGQ9BSJ6 248 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 ASPNQ9BXN1 380 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 EVA1AQ9H8M9 152 aa14.06□□□□□ -0.16
SNX1-213ENST00000561026 FBXO9Q9UK97 447 aaPredicted RBP14.06□□□□□ -0.16
SNX1-213ENST00000561026 IGHV2OR16-5A0A0B4J2B6 119 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 RNF212BA8MTL3 300 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 THBS4P35443 961 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 GZMKP49863 264 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 PPOXP50336 477 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 PCBP3P57721 371 aaKnown RBP14.05□□□□□ -0.16
SNX1-213ENST00000561026 NPRL3Q12980 569 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 PMS2P3Q13401 168 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 GGTLC2Q14390 218 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 TTMPQ5BVD1 217 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 SWT1Q5T5J6 900 aaKnown RBP14.05□□□□□ -0.16
SNX1-213ENST00000561026 CARD17Q5XLA6 110 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 MDP1Q86V88 176 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 RANBP3LQ86VV4 465 aaPredicted RBP14.05□□□□□ -0.16
SNX1-213ENST00000561026 PTOV1Q86YD1 416 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 SMYD1Q8NB12 490 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 DYDC1Q8WWB3 177 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 TXNDC15Q96J42 360 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 MOGAT1Q96PD6 335 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 DOK1Q99704 481 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 TMEM43Q9BTV4 400 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 EMC6Q9BV81 110 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 BEX2Q9BXY8 128 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 MED29Q9NX70 200 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 MRPL39Q9NYK5 338 aaKnown RBP14.05□□□□□ -0.16
SNX1-213ENST00000561026 ANGPT4Q9Y264 503 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 NOX1Q9Y5S8 564 aa14.05□□□□□ -0.16
SNX1-213ENST00000561026 SLC35F4A4IF30 521 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 SEC14L2O76054 403 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 ZNF16P17020 682 aaPredicted RBP14.04□□□□□ -0.16
SNX1-213ENST00000561026 NPR2P20594 1047 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 CAPZA2P47755 286 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 POU3F1Q03052 451 aaPredicted RBP14.04□□□□□ -0.16
SNX1-213ENST00000561026 PUDPQ08623 228 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 CARTPTQ16568 116 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 DUSP7Q16829 419 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 ZNF613Q6PF04 617 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 ZNF627Q7L945 461 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 PXKQ7Z7A4 578 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 C10orf53Q8N6V4 93 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 C11orf65Q8NCR3 313 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 ZNF540Q8NDQ6 660 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 STON2Q8WXE9 905 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 ANKRD27Q96NW4 1050 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 RAB1BQ9H0U4 201 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 B3GNT2Q9NY97 397 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 LPAR3Q9UBY5 353 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 LEF1Q9UJU2 399 aaPredicted RBP14.04□□□□□ -0.16
SNX1-213ENST00000561026 USP22Q9UPT9 525 aa14.04□□□□□ -0.16
SNX1-213ENST00000561026 IGHV4-61A0A0C4DH41 118 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 TMEM129A0AVI4 362 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 LRRN3E7EW58 273 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 hCG_2039718K7EN88 272 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 PLPP3O14495 311 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 LMX1BO60663 402 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 FMO6PO60774 539 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 HLA-HP01893 362 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 C8BP07358 591 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 AHCYP23526 432 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 RBBP4Q09028 425 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 LINC00114Q6XXX2 140 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 DHDDSQ86SQ9 333 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 WDFY1Q8IWB7 410 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 SVOPLQ8N434 492 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 DPP10Q8N608 796 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 TMEM158Q8WZ71 300 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 MCHR1Q99705 422 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 ARHGDIGQ99819 225 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 SHARPINQ9H0F6 387 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 NOX3Q9HBY0 568 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 B3GAT2Q9NPZ5 323 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 INTS9Q9NV88 658 aaKnown RBP14.03□□□□□ -0.16
SNX1-213ENST00000561026 NDUFAF1Q9Y375 327 aa14.03□□□□□ -0.16
SNX1-213ENST00000561026 MALRD1Q5VYJ5 2156 aa14.02□□□□□ -0.16
SNX1-213ENST00000561026 ZNF726A6NNF4 738 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms