RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MAPK11Q15759 364 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 PCGF3Q3KNV8 242 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 C5orf46Q6UWT4 87 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 ZNF836Q6ZNA1 936 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 H1FNTQ75WM6 255 aaPredicted RBP15.85■□□□□ 0.13
TPM1-226ENST00000560959 SNX32Q86XE0 403 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 VRK2Q86Y07 508 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 C20orf196Q8IYI0 205 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 EIF1ADQ8N9N8 165 aaKnown RBP15.85■□□□□ 0.13
TPM1-226ENST00000560959 MGARPQ8TDB4 240 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
TPM1-226ENST00000560959 C12orf10Q9HB07 376 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 MYEF2Q9P2K5 600 aaKnown RBP15.85■□□□□ 0.13
TPM1-226ENST00000560959 SLC7A8Q9UHI5 535 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 DUSP13Q9UII6 198 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 ZNF232Q9UNY5 417 aa15.85■□□□□ 0.13
TPM1-226ENST00000560959 E9PBE3 544 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 NAT2P11245 290 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 CRYBB2P43320 205 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 RPS5P46782 204 aaKnown RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 SELENOVP59797 346 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 MAD2L1BPQ15013 274 aaPredicted RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 LARS2Q15031 903 aaKnown RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 OCLNQ16625 522 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 FAM69AQ5T7M9 428 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 DCAF12L2Q5VW00 463 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 CLIP4Q8N3C7 705 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 ADPRHL1Q8NDY3 354 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 UBLCP1Q8WVY7 318 aaPredicted RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 DVL3Q92997 716 aaPredicted RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 SLC35B4Q969S0 331 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 KTI12Q96EK9 354 aaPredicted RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 PANX1Q96RD7 426 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 ZMAT3Q9HA38 289 aaKnown RBP15.84■□□□□ 0.13
TPM1-226ENST00000560959 P2RX2Q9UBL9 471 aa15.84■□□□□ 0.13
TPM1-226ENST00000560959 SLC22A23A1A5C7 686 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 POM121CA8CG34 1229 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 C17orf100A8MU93 164 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 M0R3G1 203 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 TRAF3IP2O43734 574 aaPredicted RBP15.83■□□□□ 0.12
TPM1-226ENST00000560959 PRSS23O95084 383 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 KRT75O95678 551 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 PRG2P13727 222 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 LSP1P33241 339 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 RAB1AP62820 205 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 PIGFQ07326 219 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 GLIPR1L2Q4G1C9 344 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 COX20Q5RI15 118 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 PHYHD1Q5SRE7 291 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 C6orf89Q6UWU4 347 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 ZNF813Q6ZN06 617 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 ZNF621Q6ZSS3 439 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 SYT14Q8NB59 555 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 KIF18AQ8NI77 898 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 RNF217Q8TC41 542 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 TCP10LQ8TDR4 215 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 SPATA9Q9BWV2 254 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 B3GAT2Q9NPZ5 323 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 HINT3Q9NQE9 182 aaKnown RBP15.83■□□□□ 0.12
TPM1-226ENST00000560959 ZNF224Q9NZL3 707 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 SEC14L4Q9UDX3 406 aa15.83■□□□□ 0.12
TPM1-226ENST00000560959 ZNF443Q9Y2A4 671 aaPredicted RBP15.83■□□□□ 0.12
TPM1-226ENST00000560959 IGLV3-9A0A075B6K5 115 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 A0A1W2PPW3 197 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 M0R082 166 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 SEC14L2O76054 403 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 UBL3O95164 117 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 RAB36O95755 333 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 IGHV2-5P01817 119 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 BPGMP07738 259 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 ARAFP10398 606 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 PRTN3P24158 256 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 MAGEB1P43366 347 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 PTDSS1P48651 473 aaKnown RBP15.82■□□□□ 0.12
TPM1-226ENST00000560959 CRISP3P54108 245 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 ZP4Q12836 540 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 CHI3L2Q15782 390 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 ATG16L1Q676U5 607 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 RBMS3Q6XE24 437 aaKnown RBP15.82■□□□□ 0.12
TPM1-226ENST00000560959 TREML1Q86YW5 311 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 GSPT2Q8IYD1 628 aaKnown RBP15.82■□□□□ 0.12
TPM1-226ENST00000560959 ZNF417Q8TAU3 575 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 LRRC58Q96CX6 371 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 ZNF587Q96SQ5 575 aaPredicted RBP15.82■□□□□ 0.12
TPM1-226ENST00000560959 C7orf69Q9H7B7 122 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 SLCO1C1Q9NYB5 712 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 OPN4Q9UHM6 478 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 POFUT2Q9Y2G5 429 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 IFT52Q9Y366 437 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 CHST2Q9Y4C5 530 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 CORINQ9Y5Q5 1042 aa15.82■□□□□ 0.12
TPM1-226ENST00000560959 PPIAL4EA0A075B759 164 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 PPIAL4CA0A0B4J2A2 164 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 PPIAL4DF5H284 164 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 MS4A18H0YCH9 400 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 SERPINA5P05154 406 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 MYZAPP0CAP1 466 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 PPIAL4FP0DN26 164 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 ZNF250P15622 560 aa15.81■□□□□ 0.12
TPM1-226ENST00000560959 GIPRP48546 466 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms