RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 NEURL3Q96EH8 262 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 SLC35A5Q9BS91 424 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 SLC38A1Q9H2H9 487 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 HAO1Q9UJM8 370 aa15.26■□□□□ 0.03
TSPAN3-208ENST00000560514 PRAMEF27A3QJZ7 478 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 POM121CA8CG34 1229 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 HMGN4O00479 90 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 ITM2AO43736 263 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 RP2O75695 350 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 NCR1O76036 304 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 RAB36O95755 333 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 GKN3PP0CG01 181 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 NR2F1P10589 423 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 PNMTP11086 282 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 PIGFQ07326 219 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 CHI3L2Q15782 390 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 DPY19L1Q2PZI1 675 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 ALKBH6Q3KRA9 238 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 KRT71Q3SY84 523 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 TNFAIP8L3Q5GJ75 292 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 ATG16L1Q676U5 607 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 TMEM154Q6P9G4 183 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 LRP11Q86VZ4 500 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 MFSD8Q8NHS3 518 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 RNF217Q8TC41 542 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 SNX33Q8WV41 574 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 TESCQ96BS2 214 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 OXGR1Q96P68 337 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 PARD6BQ9BYG5 372 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 ZMAT3Q9HA38 289 aaKnown RBP15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 MED29Q9NX70 200 aa15.25■□□□□ 0.03
TSPAN3-208ENST00000560514 M0R3G1 203 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 TPD52L2O43399 206 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 ZNF35P13682 527 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 PRTN3P24158 256 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 ZFP36P26651 326 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 PTDSS1P48651 473 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 SLC1A6P48664 564 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 IL13RA1P78552 427 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 RETREG3Q86VR2 466 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 RNF130Q86XS8 419 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 SIGLECL1Q8N7X8 197 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 ZNF781Q8N8C0 355 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 STK35Q8TDR2 534 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 ZNF837Q96EG3 531 aaPredicted RBP15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 TIMD4Q96H15 378 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 CACYBPQ9HB71 228 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 B3GAT2Q9NPZ5 323 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 RLIMQ9NVW2 624 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 MYEF2Q9P2K5 600 aaKnown RBP15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 SLC7A8Q9UHI5 535 aa15.24■□□□□ 0.03
TSPAN3-208ENST00000560514 WDR91A4D1P6 747 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 RPS4Y1P22090 263 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 MAGEB1P43366 347 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 RPS5P46782 204 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 CLNS1AP54105 237 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 TXNL4AP83876 142 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 STX3Q13277 289 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 PCGF3Q3KNV8 242 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 LIN52Q52LA3 116 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 ZNF813Q6ZN06 617 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 SNX32Q86XE0 403 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 TRIML2Q8N7C3 387 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 DUX5Q96PT3 197 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 GPA33Q99795 319 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 C20orf27Q9GZN8 174 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 B3GNT2Q9NY97 397 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 FBXL3Q9UKT7 428 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 RAB21Q9UL25 225 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 POFUT2Q9Y2G5 429 aa15.23■□□□□ 0.03
TSPAN3-208ENST00000560514 IGHV1-69-2A0A0G2JMI3 117 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 CDHR4A6H8M9 788 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 CLDN25C9JDP6 229 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 ZNF14P17017 642 aaPredicted RBP15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 LBPP18428 481 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 CCL8P80075 99 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 CASP8Q14790 479 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 FXNQ16595 210 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 CARD17Q5XLA6 110 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 RGS7BPQ6MZT1 257 aaPredicted RBP15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 OR52P1PQ8NH57 321 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 RAB1CQ92928 201 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 PKNOX2Q96KN3 472 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 SORT1Q99523 831 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 DENND2DQ9H6A0 471 aaPredicted RBP15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 ARMC7Q9H6L4 198 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 HINT3Q9NQE9 182 aaKnown RBP15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 DECR2Q9NUI1 292 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 TAAR3PQ9P1P4 343 aa15.22■□□□□ 0.03
TSPAN3-208ENST00000560514 DSPPQ9NZW4 1301 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 SLC22A23A1A5C7 686 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 DNAJC9-AS1A6NH13 148 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 C17orf100A8MU93 164 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 AIM2O14862 343 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 DEAF1O75398 565 aaPredicted RBP15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 ACAA2P42765 397 aaKnown RBP15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 GIPRP48546 466 aa15.21■□□□□ 0.03
TSPAN3-208ENST00000560514 RAB1AP62820 205 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms