RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 LRRC42Q9Y546 428 aa8.34□□□□□ -1.07
HERC1-206ENST00000559996 PCDHGB5Q9Y5G0 923 aa8.34□□□□□ -1.07
HERC1-206ENST00000559996 IER3IP1Q9Y5U9 82 aa8.34□□□□□ -1.07
HERC1-206ENST00000559996 FLVCR1Q9Y5Y0 555 aa8.34□□□□□ -1.07
HERC1-206ENST00000559996 PRRC2CQ9Y520 2896 aaKnown RBP8.34□□□□□ -1.07
HERC1-206ENST00000559996 MBD3L4A6NDZ8 208 aaPredicted RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 MBD3L3A6NE82 208 aaPredicted RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 MBD3L5A6NJ08 208 aaPredicted RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 NPIPB13A6NJU9 1138 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 NPIPB4C9JG80 1138 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 H0YAE9 185 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 SURF4O15260 269 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 RNF13O43567 381 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 VAMP5O95183 116 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 PPP1R3DO95685 299 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 APEHP13798 732 aaKnown RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 HIST1H1CP16403 213 aaKnown RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 AHCYP23526 432 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 POU1F1P28069 291 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 CEACAM8P31997 349 aaPredicted RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 GGT2P36268 569 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 RAD23AP54725 363 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 NUP107P57740 925 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 RPS3AP61247 264 aaKnown RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 ISL1P61371 349 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 ACKR1Q16570 336 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 PGGHGQ32M88 737 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 C6orf52Q5T4I8 152 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 TMEM225Q6GV28 225 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 RPL13AP3Q6NVV1 102 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 ZNF585AQ6P3V2 769 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 GFRALQ6UXV0 394 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 PTCHD4Q6ZW05 846 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 SLC35D2Q76EJ3 337 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 NANOGNBQ7Z5D8 188 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 TUSC5Q8IXB3 177 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 SLC43A2Q8N370 569 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 DHRSXQ8N5I4 330 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 NPEPL1Q8NDH3 523 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 OR9K2Q8NGE7 335 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 MBD3L2Q8NHZ7 208 aaPredicted RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 FANK1Q8TC84 345 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 ZNRF4Q8WWF5 429 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 NMD3Q96D46 503 aaKnown RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 ZNF570Q96NI8 536 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 MUS81Q96NY9 551 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 NAA11Q9BSU3 229 aaPredicted RBP8.33□□□□□ -1.08
HERC1-206ENST00000559996 ADI1Q9BV57 179 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 KATNB1Q9BVA0 655 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 TXNIPQ9H3M7 391 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 RIBC2Q9H4K1 309 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 INIPQ9NRY2 104 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 MED29Q9NX70 200 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 ZNF226Q9NYT6 803 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 AASSQ9UDR5 926 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 ZNF175Q9Y473 711 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 COL6A6A6NMZ7 2263 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 POLEQ07864 2286 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 ARHGAP21Q5T5U3 1957 aa8.33□□□□□ -1.08
HERC1-206ENST00000559996 DOCK7Q96N67 2140 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 IGKV1D-43A0A0B4J1Z2 117 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ZNF724A8MTY0 619 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 H3BN98 237 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 M0R129 80 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 DENRO43583 198 aaKnown RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 PRKYO43930 277 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 SLC19A2O60779 497 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 WDR1O75083 606 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 PLGP00747 810 aaPredicted RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 TPOP07202 933 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 IFNGR1P15260 489 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 SLC6A6P31641 620 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 GRK5P34947 590 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 CAPGP40121 348 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 KIR2DL2P43627 348 aaPredicted RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 RPL27P61353 136 aaKnown RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 MYBPC1Q00872 1141 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 RASGEF1BQ0VAM2 473 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 FOXF2Q12947 444 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 KEAP1Q14145 624 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 MELKQ14680 651 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 HIST3H3Q16695 136 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 MESTQ5EB52 335 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 PHYHD1Q5SRE7 291 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 SLC35F1Q5T1Q4 408 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ZNF691Q5VV52 312 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 C3P1Q6ZMU1 363 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 NUFIP2Q7Z417 695 aaKnown RBP8.32□□□□□ -1.08
HERC1-206ENST00000559996 ENTHD1Q8IYW4 607 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 TMEM123Q8N131 208 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ZNF843Q8N446 348 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 ARIH2OSQ8N7S6 290 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 NAXEQ8NCW5 288 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 OR2T33Q8NG76 320 aa8.32□□□□□ -1.08
HERC1-206ENST00000559996 RHOXF1Q8NHV9 184 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms