RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 MAP2K3P46734 347 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 CBFBQ13951 182 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 SLC25A35Q3KQZ1 300 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 MESTQ5EB52 335 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TRILQ7L0X0 811 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 TRMT10AQ8TBZ6 339 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
RABGGTA-212ENST00000559974 PTPRZ1P23471 2315 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 A0A0G2JMP0 313 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 A0A0X1KG70 313 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 SCO2O43819 266 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 FADS1O60427 444 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 UCHL1P09936 223 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 GRPRP30550 384 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 P2RX1P51575 399 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ACY1Q03154 408 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF684Q5T5D7 378 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 GPR139Q6DWJ6 353 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 UBE2J2Q8N2K1 259 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 OR4M2Q8NGB6 313 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ZC3HAV1LQ96H79 300 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 OR14A2Q96R54 314 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 KCNJ15Q99712 375 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 PDCD1LG2Q9BQ51 273 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 MFRPQ9BY79 579 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 RBFOX1Q9NWB1 397 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 IGLV3-12A0A075B6K2 115 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 A0A1W2PPK0 400 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 OR6C70A6NIJ9 312 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 NOTOA8MTQ0 251 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 PRR32B1ATL7 298 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 FLRT2O43155 660 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 LYRM1O43325 122 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 SLC25A12O75746 678 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ANKRD34CP0C6C1 535 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 INPP1P49441 399 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 FOXL2P58012 376 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 RNF4P78317 190 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 SLC6A19Q695T7 634 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 SCAIQ8N9R8 606 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 OR6F1Q8NGZ6 308 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 OR2T4Q8NH00 348 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 IRF2BPLQ9H1B7 796 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 RNF121Q9H920 327 aa13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF346Q9UL40 294 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-212ENST00000559974 ALPK2Q86TB3 2170 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 IGHV3-20A0A0C4DH32 117 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 H7C1C5 153 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 PAHP00439 452 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 RENP00797 406 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 MT-ATP6P00846 226 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 POLR2HP52434 150 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 LCN6P62502 163 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 SQSTM1Q13501 440 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 QPRTQ15274 297 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 NR0B2Q15466 257 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 KCNJ8Q15842 424 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 OVCH1Q7RTY7 1134 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 MAMDC2Q7Z304 686 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 KCTD20Q7Z5Y7 419 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 TIGD4Q8IY51 512 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 RHBDD1Q8TEB9 315 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 FRMD6Q96NE9 622 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF221Q9UK13 617 aa13.1□□□□□ -0.31
RABGGTA-212ENST00000559974 TMEM72A0PK05 275 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 IDSB3KWA1 339 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 ZNF879B4DU55 563 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 PSMD9O00233 223 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 AGRPO00253 132 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 DCTN6O00399 190 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 YKT6O15498 198 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 ATP6V1G1O75348 118 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 TACSTD2P09758 323 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 TRAPPC2P0DI81 140 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 TRAPPC2BP0DI82 140 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 EPXP11678 715 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 PITPNBP48739 271 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 CLDN6P56747 220 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 HSD17B12Q53GQ0 312 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 C1QL3Q5VWW1 255 aa13.09□□□□□ -0.31
RABGGTA-212ENST00000559974 PLET1Q6UQ28 207 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms