RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF57Q68EA5 555 aaPredicted RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 APRG1Q8IVJ8 170 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CMTM8Q8IZV2 173 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 IQCKQ8N0W5 287 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 SVOPLQ8N434 492 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 TMEM104Q8NE00 496 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CLHC1Q8NHS4 586 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 FLVCR1-AS1Q8TAF5 88 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CCDC126Q96EE4 140 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 SEC22AQ96IW7 307 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 C9orf72Q96LT7 481 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OXGR1Q96P68 337 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CSPG4P5Q96PW8 444 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CYP2S1Q96SQ9 504 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 TM6SF2Q9BZW4 377 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OR2AG1Q9H205 316 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OR52A5Q9H2C5 316 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OR51M1Q9H341 326 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 ZNF446Q9NWS9 450 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 B3GNT2Q9NY97 397 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 IFNKQ9P0W0 207 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CD300AQ9UGN4 299 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 FLVCR2Q9UPI3 526 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 VSIG4Q9Y279 399 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 KCNIP3Q9Y2W7 256 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 L3MBTL1Q9Y468 752 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CPQQ9Y646 472 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 AUP1Q9Y679 476 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 AK9Q5TCS8 1911 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 AKNAQ7Z591 1439 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 A0A1B0GUS0 222 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 TRABD2BA6NFA1 517 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 IQCF5A8MTL0 148 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 PDZK1P1A8MUH7 402 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 ZNF99A8MXY4 864 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 DYNC1I1O14576 645 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 AIREO43918 545 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 SOX15O60248 233 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 TOM1O60784 492 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 CCNB2O95067 398 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 UBTFL1P0CB47 393 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 CCL2P13500 99 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 HOXB8P17481 243 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 CALCRP30988 508 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 ACVR1BP36896 505 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 PTGDSP41222 190 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 SLC1A2P43004 574 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 CCNHP51946 323 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 FBXW4P57775 412 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 MRPS11P82912 194 aaKnown RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 CYTH1Q15438 398 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 VAMP3Q15836 100 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 CCL14Q16627 93 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 SLC22A6Q4U2R8 563 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 C14orf28Q4W4Y0 310 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 FHL5Q5TD97 284 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 GPR157Q5UAW9 335 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 CLEC6AQ6EIG7 209 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 TTC23LQ6PF05 361 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 ULK3Q6PHR2 472 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 GPR65Q8IYL9 337 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 JAGN1Q8N5M9 183 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 MS4A15Q8N5U1 240 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 Q8N7P7 452 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 TTC29Q8NA56 475 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 INO80EQ8NBZ0 244 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 ADAMTS16Q8TE57 1224 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 TRNT1Q96Q11 434 aaKnown RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 HCAR1Q9BXC0 346 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 OPN3Q9H1Y3 402 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 RBKSQ9H477 322 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 CSNK1G1Q9HCP0 422 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 AMBNQ9NP70 447 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 TNFRSF19Q9NS68 423 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 PAK1IP1Q9NWT1 392 aaPredicted RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 ADAM22Q9P0K1 906 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 ZNF581Q9P0T4 197 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 MYEF2Q9P2K5 600 aaKnown RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 B4GALT7Q9UBV7 327 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 CTSFQ9UBX1 484 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 SLC2A6Q9UGQ3 507 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 RIMS3Q9UJD0 308 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 C15orf41Q9Y2V0 281 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 RPL36Q9Y3U8 105 aaKnown RBP2.8□□□□□ -1.96
SPG11-218ENST00000559754 SAR1BQ9Y6B6 198 aa2.8□□□□□ -1.96
SPG11-218ENST00000559754 ZNF646O15015 1829 aaPredicted RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 TRAV6A0A075B6T7 132 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 LOC100131303A0A0U1RQF7 123 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 TEX48A0A1B0GUV7 120 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 A0A1B0GWB2 263 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 E9PLD3 99 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 GFYI3L273 518 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 UGT1A9O60656 530 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 ZNF354AO60765 605 aaPredicted RBP2.79□□□□□ -1.96
SPG11-218ENST00000559754 FCN3O75636 299 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 NOL4O94818 638 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 LALBAP00709 142 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 HLA-HP01893 362 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 FGF1P05230 155 aa2.79□□□□□ -1.96
SPG11-218ENST00000559754 C2P06681 752 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms