RNA–Protein interactions for RNA: ENST00000559603.1

RNF213-208, Transcript of ring finger protein 213, human

TSL 2

Gene RNF213, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF213-208	ENST00000559603	HGFAC	Q04756	655 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	KLF10	Q13118	480 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	PMS2P3	Q13401	168 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	VMAC	Q2NL98	169 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	TRMT5	Q32P41	509 aa	Known RBP	13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	METTL21C	Q5VZV1	264 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	ZNF544	Q6NX49	715 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	KLHL24	Q6TFL4	600 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	C5orf46	Q6UWT4	87 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	DEPDC4	Q8N2C3	294 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	OR6S1	Q8NH40	331 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	FBXO17	Q96EF6	278 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	ADAD1	Q96M93	576 aa	Known RBP	13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	PRSS27	Q9BQR3	290 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	SAR1A	Q9NR31	198 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	SLC7A7	Q9UM01	511 aa		13.79	□□□□□ -0.2
RNF213-208	ENST00000559603	SVEP1	Q4LDE5	3571 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	CHP2	O43745	196 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	FMO6P	O60774	539 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	SHOX2	O60902	331 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	C8B	P07358	591 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	NQO1	P15559	274 aa	Known RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	UBE2N	P61088	152 aa	Known RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	CAMK2D	Q13557	499 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	SWT1	Q5T5J6	900 aa	Known RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	REP15	Q6BDI9	236 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	ZNF613	Q6PF04	617 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	CCDC80	Q76M96	950 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	MDP1	Q86V88	176 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	UEVLD	Q8IX04	471 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	GPR137C	Q8N3F9	429 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	C10orf53	Q8N6V4	93 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	ADAMTS16	Q8TE57	1224 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	LRRC58	Q96CX6	371 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	ZNF75A	Q96N20	296 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	ZNF583	Q96ND8	569 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	SIKE1	Q9BRV8	207 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	ASPN	Q9BXN1	380 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	BARX1	Q9HBU1	254 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	OBP2B	Q9NPH6	170 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	MRPL39	Q9NYK5	338 aa	Known RBP	13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	TAS2R5	Q9NYW4	299 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	ZNF224	Q9NZL3	707 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	SLC13A4	Q9UKG4	626 aa		13.78	□□□□□ -0.2
RNF213-208	ENST00000559603	C11orf98	E9PRG8	122 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	KPNA4	O00629	521 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	SERPINI2	O75830	405 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	CH25H	O95992	272 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	IGKV3-15	P01624	115 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	HLA-H	P01893	362 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	IGFBP1	P08833	259 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	IDH3G	P51553	393 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	GUCY1A3	Q02108	690 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	PUDP	Q08623	228 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	RAB35	Q15286	201 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	ADIPOQ	Q15848	244 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	MSMP	Q1L6U9	139 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	C1QTNF12	Q5T7M4	302 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	SNX32	Q86XE0	403 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	ANKS4B	Q8N8V4	417 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	SCAI	Q8N9R8	606 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	PIK3C3	Q8NEB9	887 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	SORCS2	Q96PQ0	1159 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	ZNF426	Q9BUY5	554 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	KATNB1	Q9BVA0	655 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	MEPE	Q9NQ76	525 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	CA10	Q9NS85	328 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	B3GNT2	Q9NY97	397 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	SELENON	Q9NZV5	590 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	CORIN	Q9Y5Q5	1042 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	MXRA5	Q9NR99	2828 aa		13.77	□□□□□ -0.21
RNF213-208	ENST00000559603	LOC100653049	A0A140TA62	436 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	ZNF99	A8MXY4	864 aa	Predicted RBP	13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	MRAS	O14807	208 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	KRT34	O76011	436 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	IFNGR1	P15260	489 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	CBR1	P16152	277 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	THBS4	P35443	961 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	ARFIP2	P53365	341 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	SH3BGR	P55822	239 aa	Predicted RBP	13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	BID	P55957	195 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	ZNF74	Q16587	644 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	VHLL	Q6RSH7	139 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	SLC46A3	Q7Z3Q1	461 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	PXK	Q7Z7A4	578 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	PATL1	Q86TB9	770 aa	Known RBP	13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	NKAIN4	Q8IVV8	208 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	ANKK1	Q8NFD2	765 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	OR5J2	Q8NH18	312 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	FGFBP3	Q8TAT2	258 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	C10orf105	Q8TEF2	133 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	MS4A3	Q96HJ5	214 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	EPYC	Q99645	322 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	MDFI	Q99750	246 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	RHNO1	Q9BSD3	238 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	PCDHAC1	Q9H158	963 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	EVA1A	Q9H8M9	152 aa		13.76	□□□□□ -0.21
RNF213-208	ENST00000559603	ATR	Q13535	2644 aa		13.75	□□□□□ -0.21
RNF213-208	ENST00000559603	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms