RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 AQP8O94778 261 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 IFNGR1P15260 489 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 HIST1H1CP16403 213 aaKnown RBP16.11■□□□□ 0.17
CLPX-203ENST00000558958 ZNF43P17038 809 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 PCYT1AP49585 367 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 MLLT10P55197 1068 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 EMC4Q5J8M3 183 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 PLXDC2Q6UX71 529 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 SLC35D2Q76EJ3 337 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 THAP5Q7Z6K1 395 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 ENTHD1Q8IYW4 607 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 LSM14AQ8ND56 463 aaKnown RBP16.11■□□□□ 0.17
CLPX-203ENST00000558958 OR9K2Q8NGE7 335 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 TRUB1Q8WWH5 349 aaKnown RBP16.11■□□□□ 0.17
CLPX-203ENST00000558958 CNBD2Q96M20 576 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 ZNF226Q9NYT6 803 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 RNF6Q9Y252 685 aa16.11■□□□□ 0.17
CLPX-203ENST00000558958 PRKYO43930 277 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 SLC2A10O95528 541 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 DAP3P51398 398 aaKnown RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 SLC16A1P53985 500 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 IL5RAQ01344 420 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 RASGEF1BQ0VAM2 473 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 MED21Q13503 144 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 C1DQ13901 141 aaKnown RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 ARMC4Q5T2S8 1044 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 PTCHD4Q6ZW05 846 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 CREB3L2Q70SY1 520 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 MARVELD2Q8N4S9 558 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ARIH2OSQ8N7S6 290 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 TCEANCQ8N8B7 351 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 OR8J1Q8NGP2 316 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 RHOXF1Q8NHV9 184 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ZNF519Q8TB69 540 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 FAM57AQ8TBR7 257 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ABHD3Q8WU67 409 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 RASD2Q96D21 266 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 TXNDC15Q96J42 360 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 PRRG4Q9BZD6 226 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 MED29Q9NX70 200 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 CLCF1Q9UBD9 225 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 KLHL21Q9UJP4 597 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ING1Q9UK53 422 aaPredicted RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 SLC22A20A6NK97 555 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 RIIAD1A6NNX1 92 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ATXN7O15265 892 aaPredicted RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 MPZL2O60487 215 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 TGM6O95932 706 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 BCL10O95999 233 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 EDN3P14138 238 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 GABRB1P18505 474 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 SNRPGP62308 76 aaKnown RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 CD47Q08722 323 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 NFATC3Q12968 1075 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 KRR1Q13601 381 aaKnown RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 MELKQ14680 651 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 MAD2L1BPQ15013 274 aaPredicted RBP16.1■□□□□ 0.17
CLPX-203ENST00000558958 PDK3Q15120 406 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 GFRALQ6UXV0 394 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ZIC4Q8N9L1 334 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 OR52E2Q8NGJ4 325 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 OR4K13Q8NH42 304 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 FBLIM1Q8WUP2 373 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 ASB10Q8WXI3 467 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 PLEKHA8Q96JA3 519 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 IL4I1Q96RQ9 567 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 RASSF1Q9NS23 344 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 KLHL9Q9P2J3 617 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 GPR52Q9Y2T5 361 aa16.1■□□□□ 0.17
CLPX-203ENST00000558958 GTF3C1Q12789 2109 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 IGKV3D-15A0A087WSY6 115 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 TLX2O43763 284 aaPredicted RBP16.09■□□□□ 0.17
CLPX-203ENST00000558958 IFNGP01579 166 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 TPOP07202 933 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 FCGR2AP12318 317 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 GABRA1P14867 456 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 ABOP16442 354 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 ACVR1BP36896 505 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 CDKN2AP42771 156 aaKnown RBP16.09■□□□□ 0.17
CLPX-203ENST00000558958 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLPX-203ENST00000558958 RNPS1Q15287 305 aaKnown RBP16.09■□□□□ 0.17
CLPX-203ENST00000558958 SF3B4Q15427 424 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■■■■ 30.2
CLPX-203ENST00000558958 ACSF3Q4G176 576 aaPredicted RBP16.09■□□□□ 0.17
CLPX-203ENST00000558958 MESTQ5EB52 335 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 EEF1A1P5Q5VTE0 462 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 FAM205BPQ63HN1 556 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 ZNF585AQ6P3V2 769 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 WDFY1Q8IWB7 410 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 TMEM163Q8TC26 289 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 CPT1CQ8TCG5 803 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 TRIB1Q96RU8 372 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 DDOQ99489 341 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 CALHM2Q9HA72 323 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 UBAP1Q9NZ09 502 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 AASSQ9UDR5 926 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 LRCH1Q9Y2L9 728 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 PCDHGB5Q9Y5G0 923 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 FLVCR1Q9Y5Y0 555 aa16.09■□□□□ 0.17
CLPX-203ENST00000558958 IGSF10Q6WRI0 2623 aa16.08■□□□□ 0.17
CLPX-203ENST00000558958 ALPK2Q86TB3 2170 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms