RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DPYSL2Q16555 572 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 DUSP7Q16829 419 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 USH1GQ495M9 461 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 C1orf94Q6P1W5 598 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 SLC25A34Q6PIV7 304 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 CES3Q6UWW8 571 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF836Q6ZNA1 936 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 CCDC80Q76M96 950 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 FNDC5Q8NAU1 212 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 GMCL1P1Q8NEA9 526 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 UFD1Q92890 307 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 AURKBQ96GD4 344 aaPredicted RBP1.91□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF641Q96N77 438 aaPredicted RBP1.91□□□□□ -2.1
VPS13C-207ENST00000558919 OXGR1Q96P68 337 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 SLC40A1Q9NP59 571 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 GIN1Q9NXP7 522 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 CALYQ9NYX4 217 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 CGNQ9P2M7 1197 aaKnown RBP1.91□□□□□ -2.1
VPS13C-207ENST00000558919 DDX49Q9Y6V7 483 aaKnown RBP1.91□□□□□ -2.1
VPS13C-207ENST00000558919 TUBGCP6Q96RT7 1819 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 NUP214P35658 2090 aaPredicted RBP1.9□□□□□ -2.1
VPS13C-207ENST00000558919 PLA2R1Q13018 1463 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 TCRBV9S1A1TA0A576 114 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 MBLAC1A4D2B0 266 aaPredicted RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 A8MXQ7 604 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 CPLX1O14810 134 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ATP5LO75964 103 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 OXSR1O95747 527 aaPredicted RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 BGLAPP02818 100 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ALDOBP05062 364 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 CSF3P09919 207 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 TLX1NBP0CAT3 122 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 GKN3PP0CG01 181 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 SMIM10L1P0DMW3 83 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 CCDC130P13994 396 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ZNF14P17017 642 aaPredicted RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 PGAM1P18669 254 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 LAP3P28838 519 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 CASP4P49662 377 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 RGS4P49798 205 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 CRYBB1P53674 252 aaPredicted RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ERVK-25P63136 954 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ACVR1Q04771 509 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 PDIA2Q13087 525 aaKnown RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 NADK2Q4G0N4 442 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 XKR4Q5GH76 650 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 C10orf120Q5SQS8 335 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ZDHHC21Q8IVQ6 265 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 UBALD2Q8IYN6 164 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 ZNF683Q8IZ20 524 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 PGAM4Q8N0Y7 254 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 OR2T34Q8NGX1 318 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 PHF10Q8WUB8 498 aaKnown RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 UBE2E3Q969T4 207 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 LRRC58Q96CX6 371 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 DNAJC19Q96DA6 116 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 SMIM10Q96HG1 83 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 RAB33BQ9H082 229 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 LINC00597Q9H2U6 94 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 RMND5AQ9H871 391 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 NOX3Q9HBY0 568 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 PIPOXQ9P0Z9 390 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 RNF14Q9UBS8 474 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 CHRNA9Q9UGM1 479 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 POLDIP2Q9Y2S7 368 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 TIMM10BQ9Y5J6 103 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 WIF1Q9Y5W5 379 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 NFASCO94856 1347 aa1.9□□□□□ -2.11
VPS13C-207ENST00000558919 MN1Q10571 1320 aaPredicted RBP1.9□□□□□ -2.11
VPS13C-207ENST00000558919 TRAV40A0A0B4J280 105 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 IGHV3-66A0A0C4DH42 116 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 XPO1O14980 1071 aaKnown RBP1.89□□□□□ -2.11
VPS13C-207ENST00000558919 HSMCR30P0CW71 290 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 PSMC3P17980 439 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 ATP6V1C1P21283 382 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 CNR1P21554 472 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 CALRP27797 417 aaKnown RBP1.89□□□□□ -2.11
VPS13C-207ENST00000558919 PSMA5P28066 241 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 RPL13AP40429 203 aaKnown RBP1.89□□□□□ -2.11
VPS13C-207ENST00000558919 QARSP47897 775 aaKnown RBP1.89□□□□□ -2.11
VPS13C-207ENST00000558919 GSSP48637 474 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 CBX1P83916 185 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 NCBP1Q09161 790 aaKnown RBP1.89□□□□□ -2.11
VPS13C-207ENST00000558919 KLRB1Q12918 225 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 OR5I1Q13606 314 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 PDK4Q16654 411 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 CHRFAM7AQ494W8 412 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 KRTAP13-2Q52LG2 175 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 Q5W150 140 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 TMEM225Q6GV28 225 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 GALNT17Q6IS24 598 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 THOC6Q86W42 341 aaKnown RBP1.89□□□□□ -2.11
VPS13C-207ENST00000558919 PLA2G4DQ86XP0 818 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 ARL6IP6Q8N6S5 226 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 C15orf56Q8N910 161 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 ANKFN1Q8N957 763 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 FAM133AQ8N9E0 248 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 IPMKQ8NFU5 416 aa1.89□□□□□ -2.11
VPS13C-207ENST00000558919 OR52H1Q8NGJ2 320 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms