RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PIGFQ07326 219 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 NPRL3Q12980 569 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 MELKQ14680 651 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 INTS11Q5TA45 600 aaKnown RBP10.91□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF613Q6PF04 617 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 C5orf46Q6UWT4 87 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 LINC00114Q6XXX2 140 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 DTX2Q86UW9 622 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 MEX3DQ86XN8 651 aaKnown RBP10.91□□□□□ -0.66
SMAD3-208ENST00000558827 NKAIN4Q8IVV8 208 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 TMEM123Q8N131 208 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 C17orf78Q8N4C9 275 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 OR6N1Q8NGY5 312 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 PROX1Q92786 737 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 TPD52L3Q96J77 140 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 TMEM43Q9BTV4 400 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 FAM107BQ9H098 131 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 FKRPQ9H9S5 495 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 FAIMQ9NVQ4 179 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 CMTM6Q9NX76 183 aa10.91□□□□□ -0.66
SMAD3-208ENST00000558827 HIVEP2P31629 2446 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 TRAPPC13A5PLN9 417 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 HLA-HP01893 362 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 HEXAP06865 529 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 C8BP07358 591 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 CECR9P0C854 216 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PATE4P0C8F1 98 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 IFNGR1P15260 489 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 FUT4P22083 530 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 CALCRP30988 508 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 BIDP55957 195 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 TAS2R41P59536 307 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PUDPQ08623 228 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PIN1Q13526 163 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-208ENST00000558827 MAPRE2Q15555 327 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF74Q16587 644 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 C11orf71Q6IPW1 123 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 ANKRD16Q6P6B7 361 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 NHLRC1Q6VVB1 395 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 CCDC80Q76M96 950 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 MDP1Q86V88 176 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 SLC30A8Q8IWU4 369 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 C20orf196Q8IYI0 205 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PCYOX1LQ8NBM8 494 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PIK3C3Q8NEB9 887 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 OR8J3Q8NGG0 315 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 OR5J2Q8NH18 312 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PFN4Q8NHR9 129 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 SLC41A3Q96GZ6 507 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 SH3GL1Q99961 368 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 KCNS3Q9BQ31 491 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 ELAC2Q9BQ52 826 aaKnown RBP10.9□□□□□ -0.66
SMAD3-208ENST00000558827 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 REG4Q9BYZ8 158 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 CBLN4Q9NTU7 201 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 GID8Q9NWU2 228 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 MRPL39Q9NYK5 338 aaKnown RBP10.9□□□□□ -0.66
SMAD3-208ENST00000558827 RCE1Q9Y256 329 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 POFUT2Q9Y2G5 429 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 CORINQ9Y5Q5 1042 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
SMAD3-208ENST00000558827 RTTNQ86VV8 2226 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 CR1P17927 2039 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 BBIP1A8MTZ0 92 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 INAFM1C9JVW0 142 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 BLOC1S5-TXNDC5H3BN57 136 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 RNF13O43567 381 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 AKAP8O43823 692 aaKnown RBP10.89□□□□□ -0.67
SMAD3-208ENST00000558827 FMO6PO60774 539 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 CD79AP11912 226 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 COX4I1P13073 169 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 B4GALT1P15291 398 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 FUT1P19526 365 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 NUDT6P53370 316 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 SEC24CP53992 1094 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 GYS2P54840 703 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 UGT2B15P54855 530 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 LSM11P83369 360 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD3-208ENST00000558827 MFSD13AQ14CX5 517 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 RAB35Q15286 201 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF813Q6ZN06 617 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 SLC35D2Q76EJ3 337 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 SSX8Q7RTT4 187 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 TREML1Q86YW5 311 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 MICU2Q8IYU8 434 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 SCAIQ8N9R8 606 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 ADPRHL1Q8NDY3 354 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 OR2T12Q8NG77 320 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 ADAD1Q96M93 576 aaKnown RBP10.89□□□□□ -0.67
SMAD3-208ENST00000558827 ZNF317Q96PQ6 595 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-208ENST00000558827 ULBP2Q9BZM5 246 aa10.89□□□□□ -0.67
SMAD3-208ENST00000558827 NOX3Q9HBY0 568 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms