RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 C12orf10Q9HB07 376 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 B3GAT2Q9NPZ5 323 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 TESQ9UGI8 421 aaKnown RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 POFUT2Q9Y2G5 429 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 FBN1P35555 2871 aaKnown RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 A0A087WUJ7 227 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 IGHV2OR16-5A0A0B4J2B6 119 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 ZNF726A6NNF4 738 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 MS4A18H0YCH9 400 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 M0R3H8 397 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
TPM1-211ENST00000558314 SERPINB7O75635 380 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 TGDSO95455 350 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 ERCC1P07992 297 aaPredicted RBP13.47□□□□□ -0.25
TPM1-211ENST00000558314 ARR3P36575 388 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 CDH12P55289 794 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 CAMK2DQ13557 499 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 DAG1Q14118 895 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 SQLEQ14534 574 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 CYP51A1Q16850 503 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 MS4A18Q3C1V0 323 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 C6orf89Q6UWU4 347 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 ZNF813Q6ZN06 617 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
TPM1-211ENST00000558314 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
TPM1-211ENST00000558314 MOGAT1Q96PD6 335 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
TPM1-211ENST00000558314 MCHR1Q99705 422 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 WFDC6Q9BQY6 131 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 BPESC1Q9GZL8 116 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 TPK1Q9H3S4 243 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 CRNNQ9UBG3 495 aaPredicted RBP13.47□□□□□ -0.25
TPM1-211ENST00000558314 USP22Q9UPT9 525 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 CORO2BQ9UQ03 480 aa13.47□□□□□ -0.25
TPM1-211ENST00000558314 LOC390937A0A1W2PQ73 354 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 SLC35F4A4IF30 521 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 LRP5LA4QPB2 252 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 CPSF4LA6NMK7 179 aaKnown RBP13.46□□□□□ -0.25
TPM1-211ENST00000558314 ZNF99A8MXY4 864 aaPredicted RBP13.46□□□□□ -0.25
TPM1-211ENST00000558314 RPL36A-HNRNPH2H7BZ11 118 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 NDUFS8O00217 210 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 KPNA4O00629 521 aaPredicted RBP13.46□□□□□ -0.25
TPM1-211ENST00000558314 TGFAP01135 160 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 IGKV3-15P01624 115 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 IGLV1-44P01699 117 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 BGLAPP02818 100 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 ADRA2AP08913 450 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.25
TPM1-211ENST00000558314 DAOP14920 347 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 B4GALT1P15291 398 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 SRD5A1P18405 259 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 PAX7P23759 505 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 IGFBP5P24593 272 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 MTPNP58546 118 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 MFSD13AQ14CX5 517 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 ADRM1Q16186 407 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 C20orf196Q8IYI0 205 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 CDK20Q8IZL9 346 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 HIPK4Q8NE63 616 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 CKAP2Q8WWK9 683 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 MSI2Q96DH6 328 aaKnown RBP13.46□□□□□ -0.25
TPM1-211ENST00000558314 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 BOD1Q96IK1 185 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 ANKRD27Q96NW4 1050 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 ULBP2Q9BZM5 246 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 MOV10Q9HCE1 1003 aaKnown RBP13.46□□□□□ -0.25
TPM1-211ENST00000558314 LPAR3Q9UBY5 353 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 CORINQ9Y5Q5 1042 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 ARFGEF3Q5TH69 2177 aa13.46□□□□□ -0.25
TPM1-211ENST00000558314 A0A0B4J2E0 115 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 A0A1B0GX12 115 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 VWC2LB2RUY7 222 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 LYNX1G3V0Z9 82 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 PDE5AO76074 875 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 OR6A2O95222 327 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 ADORA3P0DMS8 318 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 LYNX1P0DP58 116 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 PTDSS1P48651 473 aaKnown RBP13.45□□□□□ -0.26
TPM1-211ENST00000558314 PPOXP50336 477 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 PUDPQ08623 228 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 EFNB3Q15768 340 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 GSG1Q2KHT4 349 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
TPM1-211ENST00000558314 FAM91A1Q658Y4 838 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 NUP37Q8NFH4 326 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 ATP6V1G3Q96LB4 118 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 CPPED1Q9BRF8 314 aaPredicted RBP13.45□□□□□ -0.26
TPM1-211ENST00000558314 TMEM38AQ9H6F2 299 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 NOX3Q9HBY0 568 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 MYOZ1Q9NP98 299 aaPredicted RBP13.45□□□□□ -0.26
TPM1-211ENST00000558314 LEF1Q9UJU2 399 aaPredicted RBP13.45□□□□□ -0.26
TPM1-211ENST00000558314 FZR1Q9UM11 496 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 CMAHPQ9Y471 501 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 NOX1Q9Y5S8 564 aa13.45□□□□□ -0.26
TPM1-211ENST00000558314 ANGPT2O15123 496 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms