RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NPR2P20594 1047 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 IDSP22304 550 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 LMO2P25791 158 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ADORA2BP29275 332 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 IL12BP29460 328 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 SHMT2P34897 504 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 UGT1A3P35503 534 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 GCKP35557 465 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 CSKP41240 450 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 RPL29P47914 159 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 LINC00205P59089 165 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 KRTAP10-2P60368 255 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 UBE2MP61081 183 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 RPL32P62910 135 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 CCDC173Q0VFZ6 552 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ABRAXAS2Q15018 415 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 TRAM2Q15035 370 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 TSC22D1Q15714 1073 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 LTB4RQ15722 352 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 C17orf58Q2M2W7 97 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 PARP15Q460N3 678 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ANKRD26P1Q6NSI1 321 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 PRMT9Q6P2P2 845 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 RFWD3Q6PCD5 774 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 SMIM29Q86T20 159 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 SLC26A11Q86WA9 606 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 LRRC49Q8IUZ0 686 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ZNF547Q8IVP9 402 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 AQP11Q8NBQ7 271 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 OR10H4Q8NGA5 316 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 OR56A4Q8NGH8 313 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 OR5B3Q8NH48 314 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 OR5K2Q8NHB8 316 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 SSC4DQ8WTU2 575 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 FGF11Q92914 225 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 PAGE5Q96GU1 130 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 RNF170Q96K19 258 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 POM121L2Q96KW2 1035 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 LYZL4Q96KX0 146 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 TSSK3Q96PN8 268 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ATF6BQ99941 703 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 FAIM2Q9BWQ8 316 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 OSBPL10Q9BXB5 764 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 CHIAQ9BZP6 476 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ELOVL4Q9GZR5 314 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 HDHD2Q9H0R4 259 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 DEFB129Q9H1M3 183 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 TUBB1Q9H4B7 451 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 FOLH1BQ9HBA9 442 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 MRPL47Q9HD33 250 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 ZNF275Q9NSD4 429 aaPredicted RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 IMPAD1Q9NX62 359 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 B4GALT7Q9UBV7 327 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 ZNF282Q9UDV7 671 aaPredicted RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 MTRF1LQ9UGC7 380 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 GGA2Q9UJY4 613 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 UBQLN1Q9UMX0 589 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 MRPS28Q9Y2Q9 187 aaKnown RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 PYGO1Q9Y3Y4 419 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 UBN2Q6ZU65 1347 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 AKNAQ7Z591 1439 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 IGLV4-3A0A075B6K6 122 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 A0A1B0GTH9 108 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 FAM231BA6NCW3 169 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ZNF705EA8MWA4 302 aaPredicted RBP3.06□□□□□ -1.92
TDP1-217ENST00000557782 ZNF487B1APH4 448 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ERVV-2B6SEH9 535 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 B8ZZF3 427 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 SLC17A2O00624 439 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 GPAA1O43292 621 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 MGRN1O60291 552 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 GMDSO60547 372 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 LMX1BO60663 402 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 CBR3O75828 277 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 VAPBO95292 243 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 SLPIP03973 132 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 PATE4P0C8F1 98 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 RBMY1CP0DJD4 496 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 CTRB1P17538 263 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 TBPP20226 339 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 BGNP21810 368 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 TIMP3P35625 211 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 RGRP47804 291 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 CSRP3P50461 194 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ATP12AP54707 1039 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 UCNP55089 124 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ATP5J2P56134 94 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ERVFC1-1P60608 527 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 RPS15AP62244 130 aaKnown RBP3.06□□□□□ -1.92
TDP1-217ENST00000557782 CALCOCO2Q13137 446 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 STX3Q13277 289 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 ART3Q13508 389 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 PSMD5Q16401 504 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 RPEL1Q2QD12 228 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 PAN3Q58A45 887 aaKnown RBP3.06□□□□□ -1.92
TDP1-217ENST00000557782 TPRG1LQ5T0D9 272 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 MARCH8Q5T0T0 291 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 GPRC6AQ5T6X5 926 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 STPG1Q5TH74 334 aa3.06□□□□□ -1.92
TDP1-217ENST00000557782 AWAT2Q6E213 333 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms