RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TRGV8A0A0C4DH27 118 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 ERICH4A6NGS2 130 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 CASC3O15234 703 aaKnown RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 POLR2DO15514 142 aaKnown RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 TYROBPO43914 113 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 UPK3AO75631 287 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 KRT36O76013 467 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 HSD17B1P14061 328 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 SSR1P43307 286 aaKnown RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 EFNB2P52799 333 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 MFAP2P55001 183 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 DLX5P56178 289 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 ZNF33BQ06732 778 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 ZIC1Q15915 447 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 HADHQ16836 314 aaKnown RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 SLC5A12Q1EHB4 618 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 ISXQ2M1V0 245 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 FAM76BQ5HYJ3 339 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 C6orf226Q5I0X4 101 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 ADAMTSL4-AS1Q5T5F5 129 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 FAM219BQ5XKK7 198 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 OR8G2PQ6IF36 304 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 CARM1Q86X55 608 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 EGFL6Q8IUX8 553 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 FAM184AQ8NB25 1140 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 CCDC26Q8TAB7 109 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 MIPOL1Q8TD10 442 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 AENQ8WTP8 325 aaKnown RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 ZDHHC19Q8WVZ1 309 aaPredicted RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 DNASE2BQ8WZ79 361 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 AGAP3Q96P47 875 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 CATSPER2Q96P56 530 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 WDR13Q9H1Z4 485 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 LRTM1Q9HBL6 345 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4□□□□□ -1.77
MTHFD1-216ENST00000557539 RCOR3Q9P2K3 495 aaPredicted RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 OARD1Q9Y530 152 aa4□□□□□ -1.77
MTHFD1-216ENST00000557539 ZNF106Q9H2Y7 1883 aaKnown RBP4□□□□□ -1.77
MTHFD1-216ENST00000557539 DNAH1Q9P2D7 4330 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 TRBV7-9A0A0J9YWB2 115 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 ACOD1A6NK06 481 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 TRAFD1O14545 582 aaPredicted RBP3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 INSIG1O15503 277 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 TAPBPO15533 448 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CTAG2O75638 210 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 DIRAS1O95057 198 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 WNT2P09544 360 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 STAG3L3P0CL85 134 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 ETS2P15036 469 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 IMPDH1P20839 514 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 NMT1P30419 496 aaKnown RBP3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CASP14P31944 242 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CCKARP32238 428 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 RPL13AP40429 203 aaKnown RBP3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CCR2P41597 374 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 SNAP25P60880 206 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 PEX6Q13608 980 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 SLC25A52Q3SY17 297 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 SPANXN2Q5MJ10 180 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 LIPNQ5VXI9 398 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CEACAM19Q7Z692 300 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 METTL4Q8N3J2 472 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 BPIFB2Q8N4F0 458 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 DHRSXQ8N5I4 330 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 RFESDQ8TAC1 157 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 FAM81AQ8TBF8 368 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 SCARB1Q8WTV0 552 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 TMEM190Q8WZ59 177 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 TIMD4Q96H15 378 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 PANX1Q96RD7 426 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CHP1Q99653 195 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 HSD17B14Q9BPX1 270 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 C11orf70Q9BRQ4 267 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 TRIM62Q9BVG3 475 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 MOB1AQ9H8S9 216 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 MEPEQ9NQ76 525 aaPredicted RBP3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 KLHL28Q9NXS3 571 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 PRPF19Q9UMS4 504 aaKnown RBP3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 CA5BQ9Y2D0 317 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 DYSFO75923 2080 aa3.99□□□□□ -1.77
MTHFD1-216ENST00000557539 ABCB11O95342 1321 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 TEX48A0A1B0GUV7 120 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 MEIOCA2RUB1 952 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 ARHGEF33A8MVX0 844 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 FAM72CH0Y354 149 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 H3BMQ9 156 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 MKRN2OSH3BPM6 223 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 FCN1O00602 326 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 TFECO14948 347 aaPredicted RBP3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 LSM1O15116 133 aaKnown RBP3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 CDH16O75309 829 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 TRIM3O75382 744 aaPredicted RBP3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 KRT14P02533 472 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 SDC1P18827 310 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 HNRNPH3P31942 346 aaKnown RBP3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 FDFT1P37268 417 aa3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 NDUFV3P56181 108 aaKnown RBP3.98□□□□□ -1.77
MTHFD1-216ENST00000557539 GNB1P62873 340 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms