RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ACSS1Q9NUB1 689 aaPredicted RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 ZCCHC3Q9NUD5 404 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 SH3BP4Q9P0V3 963 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 AMDHD2Q9Y303 409 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 PTGDR2Q9Y5Y4 395 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
VPS33B-207ENST00000557470 HEATR1Q9H583 2144 aaKnown RBP5.08□□□□□ -1.6
VPS33B-207ENST00000557470 A0A0A6YYJ9 748 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 IGHV1-18A0A0C4DH31 117 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CENPVL1A0A0U1RR11 272 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SERINC4A6NH21 518 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SLCO1B7G3V0H7 640 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 GPR171O14626 319 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 KLF11O14901 512 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 TBX19O60806 448 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CYP7B1O75881 506 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 STAMBPO95630 424 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 ABHD16AO95870 558 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 RNASE1P07998 156 aaKnown RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SNRPAP09012 282 aaKnown RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 TACSTD2P09758 323 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 OR4A8P0C604 315 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 TFPIP10646 304 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 DAOP14920 347 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 PGCP20142 388 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 FUT4P22083 530 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CAPZA2P47755 286 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 PPOXP50336 477 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 ATP12AP54707 1039 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 DVL1P1P54792 670 aaPredicted RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 PRPS1P60891 318 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 LGALS3BPQ08380 585 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 COX10Q12887 443 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CCNIQ14094 377 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 TRIP10Q15642 601 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SMU1Q2TAY7 513 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 HIKESHIQ53FT3 197 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 TSPO2Q5TGU0 170 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CLEC6AQ6EIG7 209 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 ZER1Q7Z7L7 766 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 OR2T11Q8NH01 316 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 PIGXQ8TBF5 258 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SLC25A43Q8WUT9 341 aaPredicted RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 ST8SIA1Q92185 356 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 GCDHQ92947 438 aaPredicted RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 FAM162AQ96A26 154 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 MISP3Q96FF7 219 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 ARL5BQ96KC2 179 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SLC38A2Q96QD8 506 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CCDC106Q9BWC9 280 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 TEX12Q9BXU0 123 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 ACTRT3Q9BYD9 372 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 OR11A1Q9GZK7 315 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 LAT2Q9GZY6 243 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 C1orf21Q9H246 121 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CDC42EP4Q9H3Q1 356 aaKnown RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 PLK3Q9H4B4 646 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CTPS2Q9NRF8 586 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SERINC1Q9NRX5 453 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SLC7A10Q9NS82 523 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 CA10Q9NS85 328 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 MBNL3Q9NUK0 354 aaKnown RBP5.07□□□□□ -1.6
VPS33B-207ENST00000557470 C1orf109Q9NX04 203 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 SELENONQ9NZV5 590 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 BAIAP2L1Q9UHR4 511 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 KCNE5Q9UJ90 142 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 MID2Q9UJV3 735 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 FLVCR1Q9Y5Y0 555 aa5.07□□□□□ -1.6
VPS33B-207ENST00000557470 VWFP04275 2813 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM89A2RUT3 159 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 FAM157AC9JC47 383 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 G3V2L1 256 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 BCAS1O75363 584 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 MTRF1O75570 445 aaKnown RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CRCPO75575 148 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 PDE5AO76074 875 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 PMS2P2O95744 297 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CSTAP01040 98 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 GSTA1P08263 222 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 SPARCP09486 303 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 UBTFL6P0CB48 400 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 JUNBP17275 347 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CDH2P19022 906 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 PRPH2P23942 346 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 GCAP28676 217 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 MPGP29372 298 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 ASMTP46597 345 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 SLC6A9P48067 706 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CCT3P49368 545 aaKnown RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 IDH3GP51553 393 aaPredicted RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 RPL38P63173 70 aaKnown RBP5.06□□□□□ -1.6
VPS33B-207ENST00000557470 H3F3AP84243 136 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 TGFBR3Q03167 851 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 CBX3Q13185 183 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 TP53BP2Q13625 1128 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 RIN1Q13671 783 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 EFNB3Q15768 340 aa5.06□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF141Q15928 474 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms