RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RPS6KB2Q9UBS0 482 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 REV1Q9UBZ9 1251 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 USP22Q9UPT9 525 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 PCDHB14Q9Y5E9 798 aa12.11□□□□□ -0.47
SLIRP-210ENST00000557431 A0A096LPI6 279 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 A0A1B0GWA3 101 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 SAGP10523 405 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 NAT2P11245 290 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 NR4A1P22736 598 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 PTDSS1P48651 473 aaKnown RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 ACTG1P63261 375 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 TXNL4AP83876 142 aaKnown RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 CAMK2DQ13557 499 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 MFSD13AQ14CX5 517 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 GSG1Q2KHT4 349 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 SLC9B1Q4ZJI4 515 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF813Q6ZN06 617 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 PIK3C3Q8NEB9 887 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 FGFBP3Q8TAT2 258 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 MGARPQ8TDB4 240 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF317Q96PQ6 595 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 WFDC6Q9BQY6 131 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 SSU72Q9NP77 194 aaKnown RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF275Q9NSD4 429 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF232Q9UNY5 417 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
SLIRP-210ENST00000557431 A0A0G2JPF8 293 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 HNRNPCL2B2RXH8 293 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 B4DSR2 109 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 HNRNPCL3B7ZW38 293 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 TM9SF1O15321 606 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 SPRY1O43609 319 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-210ENST00000557431 SYNGR3O43761 229 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 TPST1O60507 370 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 HNRNPCL1O60812 293 aaKnown RBP12.09□□□□□ -0.47
SLIRP-210ENST00000557431 ERLIN1O75477 346 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 AVPP01185 164 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 HNRNPCL4P0DMR1 293 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 NQO1P15559 274 aaKnown RBP12.09□□□□□ -0.47
SLIRP-210ENST00000557431 ZNF14P17017 642 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-210ENST00000557431 MAGEB1P43366 347 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 GIPRP48546 466 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 RAB39AQ14964 217 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 PDCD4Q53EL6 469 aaKnown RBP12.09□□□□□ -0.47
SLIRP-210ENST00000557431 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 FAM69AQ5T7M9 428 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 SLC2A7Q6PXP3 512 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-210ENST00000557431 MAVSQ7Z434 540 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 UEVLDQ8IX04 471 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 C20orf196Q8IYI0 205 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 NFKBIDQ8NI38 313 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 MOGAT1Q96PD6 335 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 LRRC37BQ96QE4 947 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 TSPAN32Q96QS1 320 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 KLHL14Q9P2G3 628 aa12.09□□□□□ -0.47
SLIRP-210ENST00000557431 LOC105371242A0A075B767 164 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 KCNAB3O43448 404 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 CDC14BO60729 498 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 FZD7O75084 574 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 SLC22A3O75751 556 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 CLPTM1O96005 669 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 BGLAPP02818 100 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 GAAP10253 952 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 CCL2P13500 99 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 ZNF35P13682 527 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 PAX7P23759 505 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 WDR4P57081 412 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 ERVS71-1P61550 626 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 HNRNPA0Q13151 305 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 RGNQ15493 299 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 ALG10BQ5I7T1 473 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 SHQ1Q6PI26 577 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 H1FNTQ75WM6 255 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 ZNF771Q7L3S4 317 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 MIER2Q8N344 545 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 GTF3AQ92664 365 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 OR52B2Q96RD2 323 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 PAIP1Q9H074 479 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 CACYBPQ9HB71 228 aaKnown RBP12.08□□□□□ -0.48
SLIRP-210ENST00000557431 DUSP13Q9UII6 198 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 POFUT2Q9Y2G5 429 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 IFT52Q9Y366 437 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 NOX1Q9Y5S8 564 aa12.08□□□□□ -0.48
SLIRP-210ENST00000557431 DOCK11Q5JSL3 2073 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 A0A087WUJ7 227 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
SLIRP-210ENST00000557431 C11orf98E9PRG8 122 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms