RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 POP5Q969H6 163 aaKnown RBP9.39□□□□□ -0.91
LINC00239-201ENST00000556973 MCUR1Q96AQ8 359 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 PLPPR2Q96GM1 343 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 EMC6Q9BV81 110 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 MED29Q9NX70 200 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 DCHS2Q6V1P9 2916 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 FBN2P35556 2912 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 A0A1W2PPR1 153 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 A0A1W2PRG6 482 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 hCG_2039718K7EN88 272 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 GYG2O15488 501 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 UBOX5O94941 541 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 BCL10O95999 233 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 SEMG1P04279 462 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 FABP3P05413 133 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 CD3EP07766 207 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
LINC00239-201ENST00000556973 IFNGR1P15260 489 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 CDH2P19022 906 aaPredicted RBP9.38□□□□□ -0.91
LINC00239-201ENST00000556973 FUT4P22083 530 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 PRPS1P60891 318 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 VLDLRP98155 873 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 RPL18Q07020 188 aaKnown RBP9.38□□□□□ -0.91
LINC00239-201ENST00000556973 CAMK2DQ13557 499 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 LAPTM4AQ15012 233 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 IQCCQ4KMZ1 466 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 ANKRD16Q6P6B7 361 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 TBPL2Q6SJ96 375 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF730Q6ZMV8 503 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 TMPRSS11FQ6ZWK6 438 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 LINGO2Q7L985 606 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 DHFR2Q86XF0 187 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 NRMQ8IXM6 262 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 WDR31Q8NA23 367 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 OR1K1Q8NGR3 316 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 OR52N5Q8NH56 324 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 OR6X1Q8NH79 312 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 SLC7A13Q8TCU3 470 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 MAGEE2Q8TD90 523 aaPredicted RBP9.38□□□□□ -0.91
LINC00239-201ENST00000556973 NRGNQ92686 78 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 SLC25A44Q96H78 314 aaPredicted RBP9.38□□□□□ -0.91
LINC00239-201ENST00000556973 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF347Q96SE7 839 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 PIP5K1AQ99755 562 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 TMEM204Q9BSN7 226 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 THTPAQ9BU02 230 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 LIME1Q9H400 295 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 CRLF2Q9HC73 371 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 GPR35Q9HC97 309 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 IL1RAPQ9NPH3 570 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 SLC17A5Q9NRA2 495 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 AMDHD2Q9Y303 409 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 MAGED1Q9Y5V3 778 aaPredicted RBP9.38□□□□□ -0.91
LINC00239-201ENST00000556973 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 V9GYQ6 96 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 CSMD2Q7Z408 3487 aa9.38□□□□□ -0.91
LINC00239-201ENST00000556973 DPRXA6NFQ7 191 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 EFCAB9A8MZ26 197 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 M0R3G1 203 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 PIP5K1CO60331 668 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 SERPINI2O75830 405 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 GADD45GO95257 159 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 STAMBPO95630 424 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 WNT11O96014 354 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 F13BP05160 661 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 SAGP10523 405 aaPredicted RBP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 MAKP20794 623 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 DNASE1P24855 282 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 PTAFRP25105 342 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 HOXC12P31275 282 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 AQP2P41181 271 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 SLC9A3P48764 834 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 SH3BGRP55822 239 aaPredicted RBP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 BIDP55957 195 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 LSM11P83369 360 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 TRAP1Q12931 704 aaKnown RBP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 ACKR1Q16570 336 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 DNAL1Q4LDG9 190 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 CARD17Q5XLA6 110 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 LCN8Q6JVE9 175 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 PODNL1Q6PEZ8 512 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 KLHL17Q6TDP4 642 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 CYP2R1Q6VVX0 501 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 OAFQ86UD1 273 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 OR6N1Q8NGY5 312 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 BCL2L2Q92843 193 aaPredicted RBP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF566Q969W8 418 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 ASB9Q96DX5 294 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 RADILQ96JH8 1075 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 DHRS1Q96LJ7 313 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 ALKBH3Q96Q83 286 aaPredicted RBP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 BTBD10Q9BSF8 475 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 OBP2BQ9NPH6 170 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 KRCC1Q9NPI7 259 aaPredicted RBP9.37□□□□□ -0.91
LINC00239-201ENST00000556973 INIPQ9NRY2 104 aa9.37□□□□□ -0.91
LINC00239-201ENST00000556973 TMEM5Q9Y2B1 443 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms