RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 WDR31Q8NA23 367 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 HIST1H2ACQ93077 130 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 MBD6Q96DN6 1003 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 TXNDC15Q96J42 360 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 CCM2LQ9NUG4 571 aaPredicted RBP20.06■□□□□ 0.8
TDP1-216ENST00000556867 RHCGQ9UBD6 479 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 AMDHD2Q9Y303 409 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 RNF115Q9Y4L5 304 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 C11orf98E9PRG8 122 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 ARPC2O15144 300 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 PLAUP00749 431 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 FUT4P22083 530 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 BSPH1Q075Z2 132 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 KEAP1Q14145 624 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 TESK1Q15569 626 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 HMBOX1Q6NT76 420 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 CYP4Z1Q86W10 505 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 C20orf196Q8IYI0 205 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 GPR137CQ8N3F9 429 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 FAM86B1Q8N7N1 296 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 OR1K1Q8NGR3 316 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 BCAS4Q8TDM0 211 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 LRR1Q96L50 414 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 EMC6Q9BV81 110 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 UBTD1Q9HAC8 227 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 DSCAMO60469 2012 aa20.05■□□□□ 0.8
TDP1-216ENST00000556867 SLC35F4A4IF30 521 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 DPRXA6NFQ7 191 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 PIP5K1CO60331 668 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 SERPINI2O75830 405 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 CD3EP07766 207 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 T-ENOLP0DO92 83 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 CDH2P19022 906 aaPredicted RBP20.04■□□□□ 0.8
TDP1-216ENST00000556867 CD53P19397 219 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 FUT1P19526 365 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 HOXC12P31275 282 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 MSX2P35548 267 aaPredicted RBP20.04■□□□□ 0.8
TDP1-216ENST00000556867 FOXD4Q12950 439 aaPredicted RBP20.04■□□□□ 0.8
TDP1-216ENST00000556867 ACKR1Q16570 336 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 C20orf204Q6ZNR8 217 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 C7orf34Q96L11 122 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 NSMCE2Q96MF7 247 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 FOXC2Q99958 501 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 ANKRD19PQ9H560 264 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 GPR35Q9HC97 309 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 OBP2BQ9NPH6 170 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 NDUFAF4Q9P032 175 aa20.04■□□□□ 0.8
TDP1-216ENST00000556867 PRRC2AP48634 2157 aaKnown RBP20.03■□□□□ 0.8
TDP1-216ENST00000556867 A0A1W2PR80 420 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 RNF13O43567 381 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 TSPAN19P0C672 248 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 IFNGR1P15260 489 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 TBRG1Q3YBR2 411 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 CARD17Q5XLA6 110 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 ADAM5Q6NVV9 412 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 KLHL24Q6TFL4 600 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 SLC35D2Q76EJ3 337 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 WDFY1Q8IWB7 410 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 ARHGAP24Q8N264 748 aa20.03■□□□□ 0.8
TDP1-216ENST00000556867 MAGEE2Q8TD90 523 aaPredicted RBP20.03■□□□□ 0.8
TDP1-216ENST00000556867 ACOT11Q8WXI4 607 aaPredicted RBP20.03■□□□□ 0.8
TDP1-216ENST00000556867 BCL2L2Q92843 193 aaPredicted RBP20.03■□□□□ 0.8
TDP1-216ENST00000556867 ADAD1Q96M93 576 aaKnown RBP20.03■□□□□ 0.8
TDP1-216ENST00000556867 MAGED1Q9Y5V3 778 aaPredicted RBP20.03■□□□□ 0.8
TDP1-216ENST00000556867 PLCE1Q9P212 2302 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 ZNF726A6NNF4 738 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 BLOC1S5-TXNDC5H3BN57 136 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 SEMG1P04279 462 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 IFI30P13284 250 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 RHCEP18577 417 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 ART1P52961 327 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 BIDP55957 195 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 PRPS1P60891 318 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 LSM11P83369 360 aaKnown RBP eCLIP20.02■□□□□ 0.8
TDP1-216ENST00000556867 RPL18Q07020 188 aaKnown RBP20.02■□□□□ 0.8
TDP1-216ENST00000556867 HIKESHIQ53FT3 197 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 PHYHD1Q5SRE7 291 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 ANKRD16Q6P6B7 361 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 KLHL17Q6TDP4 642 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 TMEM108Q6UXF1 575 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 RNF113BQ8IZP6 322 aaKnown RBP20.02■□□□□ 0.8
TDP1-216ENST00000556867 OR6X1Q8NH79 312 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 BPIFA2Q96DR5 249 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 PYURFQ96I23 114 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 ALPK1Q96QP1 1244 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 CXXC4Q9H2H0 198 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 NELFAQ9H3P2 528 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 NMNAT1Q9HAN9 279 aaPredicted RBP20.02■□□□□ 0.8
TDP1-216ENST00000556867 CRLF2Q9HC73 371 aa20.02■□□□□ 0.8
TDP1-216ENST00000556867 FAM32AQ9Y421 112 aaKnown RBP20.02■□□□□ 0.8
TDP1-216ENST00000556867 A0A087WUU8 490 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 M0R3G1 203 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 HS3ST1O14792 307 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 CLOCKO15516 846 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 WNT11O96014 354 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 ZNF83P51522 516 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 VLDLRP98155 873 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 PRKCDQ05655 676 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 CAMK2DQ13557 499 aa20.01■□□□□ 0.79
TDP1-216ENST00000556867 CEACAM16Q2WEN9 425 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms