RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 USP22Q9UPT9 525 aa12.74□□□□□ -0.37
CHD8-211ENST00000556833 VSTM5A8MXK1 200 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 ZNF99A8MXY4 864 aaPredicted RBP12.73□□□□□ -0.37
CHD8-211ENST00000556833 RPL36A-HNRNPH2H7BZ11 118 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 VENTXO95231 258 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 HPXP02790 462 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 PATE4P0C8F1 98 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 IDO1P14902 403 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 COL8A2P25067 703 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 ARR3P36575 388 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 RGNQ15493 299 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 ALG10BQ5I7T1 473 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 GKAP1Q5VSY0 366 aaPredicted RBP12.73□□□□□ -0.37
CHD8-211ENST00000556833 C12orf54Q6X4T0 127 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 H1FNTQ75WM6 255 aaPredicted RBP12.73□□□□□ -0.37
CHD8-211ENST00000556833 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 MIER2Q8N344 545 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 PIK3C3Q8NEB9 887 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 SLC38A4Q969I6 547 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 KLHL14Q9P2G3 628 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 REV1Q9UBZ9 1251 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 IFT52Q9Y366 437 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 PCDHB14Q9Y5E9 798 aa12.73□□□□□ -0.37
CHD8-211ENST00000556833 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 FAM157AC9JC47 383 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 MS4A18H0YCH9 400 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 M0R233 179 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 CLIC1O00299 241 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 TPST1O60507 370 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 NAT2P11245 290 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 NR4A1P22736 598 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 AQP1P29972 269 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 GSG1Q2KHT4 349 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 MS4A18Q3C1V0 323 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 ELFN2Q5R3F8 820 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 ZNF771Q7L3S4 317 aaPredicted RBP12.72□□□□□ -0.37
CHD8-211ENST00000556833 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 MREGQ8N565 214 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 FAM169BQ8N8A8 192 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 CLDND2Q8NHS1 167 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 BBS10Q8TAM1 723 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 HPS1Q92902 700 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 MRPL24Q96A35 216 aaKnown RBP12.72□□□□□ -0.37
CHD8-211ENST00000556833 MOGAT1Q96PD6 335 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 ZNF317Q96PQ6 595 aaPredicted RBP12.72□□□□□ -0.37
CHD8-211ENST00000556833 PAIP1Q9H074 479 aaKnown RBP12.72□□□□□ -0.37
CHD8-211ENST00000556833 A4GALTQ9NPC4 353 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 TREM2Q9NZC2 230 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 POFUT2Q9Y2G5 429 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 NOX1Q9Y5S8 564 aa12.72□□□□□ -0.37
CHD8-211ENST00000556833 A0A1W2PPW3 197 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 TMEM120BA0PK00 339 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 UBDO15205 165 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.37
CHD8-211ENST00000556833 SNNO75324 88 aaPredicted RBP12.71□□□□□ -0.37
CHD8-211ENST00000556833 NCR1O76036 304 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 ZCCHC18P0CG32 403 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.37
CHD8-211ENST00000556833 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.37
CHD8-211ENST00000556833 AHCYP23526 432 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 GPR6P46095 362 aaPredicted RBP12.71□□□□□ -0.37
CHD8-211ENST00000556833 GIPRP48546 466 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 NCALDP61601 193 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 RUNX1T1Q06455 604 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 RAB39AQ14964 217 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.37
CHD8-211ENST00000556833 WDR93Q6P2C0 686 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 GLCCI1Q86VQ1 547 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 OR6N1Q8NGY5 312 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 YIPF5Q969M3 257 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 WFDC6Q9BQY6 131 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 PARD6BQ9BYG5 372 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 ULBP2Q9BZM5 246 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 THAP1Q9NVV9 213 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 HIF1ANQ9NWT6 349 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 B3GNT2Q9NY97 397 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 DUSP13Q9UII6 198 aa12.71□□□□□ -0.37
CHD8-211ENST00000556833 A0A087WUJ7 227 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 PPIHO43447 177 aaKnown RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 SYNGR3O43761 229 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 RAB36O95755 333 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 BGLAPP02818 100 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 ZNF14P17017 642 aaPredicted RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 PAX7P23759 505 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 CFPP27918 469 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 DVL1P1P54792 670 aaPredicted RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
CHD8-211ENST00000556833 ACTG1P63261 375 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 GALK2Q01415 458 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 PMS2P3Q13401 168 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 GCNT6Q5T4J0 391 aa12.7□□□□□ -0.38
CHD8-211ENST00000556833 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms