RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 A0A087WV62 115 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 EFNA3P52797 238 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 ZNF766Q5HY98 468 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.89■□□□□ 0.14
PTPN21-208ENST00000556564 ACBD4Q8NC06 268 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 TFAP2CQ92754 450 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 TXNDC15Q96J42 360 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 VN1R1Q9GZP7 353 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 B3GNT2Q9NY97 397 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 HRH3Q9Y5N1 445 aa15.89■□□□□ 0.14
PTPN21-208ENST00000556564 IGLV3-16A0A075B6K0 115 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 INMT-MINDY4F8WBC2 141 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 BMXP51813 675 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 COX15Q7KZN9 410 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 BHLHE23Q8NDY6 225 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 UTP4Q969X6 686 aaKnown RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 NRTNQ99748 197 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ZNF471Q9BX82 626 aaPredicted RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ZNF281Q9Y2X9 895 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 A0A096LPE4 126 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 A0A1W2PPZ6 126 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 CDHR4A6H8M9 788 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 B4DXG7 233 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 CD14P08571 375 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 RPL27P61353 136 aaKnown RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 PWWP2BQ6NUJ5 590 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ZNF547Q8IVP9 402 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ABHD4Q8TB40 342 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 V9GY05 133 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 FIGNL2A6NMB9 653 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ZNF195O14628 629 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ALPLP05186 524 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 HOXB3P14651 431 aaPredicted RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 SNTB2Q13425 540 aaKnown RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 IHHQ14623 411 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 PLEKHN1Q494U1 663 aaPredicted RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 Q96M85 177 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 SORCS2Q96PQ0 1159 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 NELFAQ9H3P2 528 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 SBK3P0C264 359 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 GSTT2P0CG29 244 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 FPR3P25089 353 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 TRIM23P36406 574 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 DUSP8Q13202 625 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 TSC22D1Q15714 1073 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 PGM2L1Q6PCE3 622 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ROBO4Q8WZ75 1007 aa15.89■□□□□ 0.13
PTPN21-208ENST00000556564 H1FXQ92522 213 aaKnown RBP15.89■□□□□ 0.13
PTPN21-208ENST00000556564 ANKRD37Q7Z713 158 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 ABI3BPQ7Z7G0 1075 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 GALNT9Q9HCQ5 603 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 EMC7Q9NPA0 242 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 ANKRD12Q6UB98 2062 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 A0A1B0GVC2 190 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 GRPP07492 148 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 PRSS3P35030 304 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 SELENBP1Q13228 472 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 DHRS4L2Q6PKH6 230 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 OR5D18Q8NGL1 313 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 PSMF1Q92530 271 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 CNRIP1Q96F85 164 aaPredicted RBP15.88■□□□□ 0.13
PTPN21-208ENST00000556564 PARP14Q460N5 1801 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 THBS1P07996 1170 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 OR4N2Q8NGD1 307 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 METTL9Q9H1A3 318 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 CNOT2Q9NZN8 540 aaKnown RBP15.88■□□□□ 0.13
PTPN21-208ENST00000556564 A0A1W2PQF6 199 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 OR2A25A4D2G3 310 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 CXADRP78310 365 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 KANSL1Q7Z3B3 1105 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 CHDHQ8NE62 594 aaPredicted RBP15.88■□□□□ 0.13
PTPN21-208ENST00000556564 TMIGD2Q96BF3 282 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 SLC6A15Q9H2J7 730 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 MED17Q9NVC6 651 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 PRAMEF4O60810 478 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 QDPRP09417 244 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 POLR2IP36954 125 aaKnown RBP15.88■□□□□ 0.13
PTPN21-208ENST00000556564 MAP2K3P46734 347 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 ACTBP60709 375 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 ACTG1P63261 375 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 SCGB1C1Q8TD33 95 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 BRIX1Q8TDN6 353 aaKnown RBP15.88■□□□□ 0.13
PTPN21-208ENST00000556564 CT55Q8WUE5 264 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 RRNAD1Q96FB5 475 aaKnown RBP15.88■□□□□ 0.13
PTPN21-208ENST00000556564 PCDHGA10Q9Y5H3 936 aa15.88■□□□□ 0.13
PTPN21-208ENST00000556564 SHISA8B8ZZ34 492 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 IKZF1Q13422 519 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 FOXRED1Q96CU9 486 aaPredicted RBP15.87■□□□□ 0.13
PTPN21-208ENST00000556564 CCDC59Q9P031 241 aaKnown RBP15.87■□□□□ 0.13
PTPN21-208ENST00000556564 A6NIN4 97 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 AIMP2Q13155 320 aaKnown RBP15.87■□□□□ 0.13
PTPN21-208ENST00000556564 NTRK2Q16620 822 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 MED18Q9BUE0 208 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 SLC19A3Q9BZV2 496 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 A0A0A6YYH2 397 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 A6NJ64 397 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 SLC22A20A6NK97 555 aa15.87■□□□□ 0.13
PTPN21-208ENST00000556564 MMP11P24347 488 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms