RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 OR4C11Q6IEV9 310 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 NIPAL1Q6NVV3 410 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 BTNL8Q6UX41 500 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 EIF3MQ7L2H7 374 aaKnown RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 SLC16A9Q7RTY1 509 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 PATL1Q86TB9 770 aaKnown RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 TPRA1Q86W33 373 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ANKRD46Q86W74 232 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 AMIGO1Q86WK6 493 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 OOSP2Q86WS3 158 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 UBQLNLQ8IYU4 475 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 GCNT2Q8N0V5 402 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 LRRC75A-AS1Q8N1F1 130 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 FAM47BQ8NA70 645 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 MFSD9Q8NBP5 474 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 TSTD1Q8NFU3 115 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 OR2L3Q8NG85 312 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 OR4A16Q8NH70 328 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 OR5K1Q8NHB7 308 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ZFP90Q8TF47 636 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 RASSF5Q8WWW0 418 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SNAPC3Q92966 411 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 MOB3AQ96BX8 217 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ERLEC1Q96DZ1 483 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 LRR1Q96L50 414 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 BMFQ96LC9 184 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 PRAP1Q96NZ9 151 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 OR1F2PQ96R84 312 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CIB1Q99828 191 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 RBM4BQ9BQ04 359 aaKnown RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 SLC35A5Q9BS91 424 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 IFT27Q9BW83 186 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 RBM4Q9BWF3 364 aaKnown RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 ANKRD60Q9BZ19 345 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 WWTR1Q9GZV5 400 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SEMA6AQ9H2E6 1030 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 PRO3102Q9H379 93 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SRMSQ9H3Y6 488 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 AUNIPQ9H7T9 357 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 TBC1D17Q9HA65 648 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CALHM2Q9HA72 323 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 FGF22Q9HCT0 170 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 DNAJC4Q9NNZ3 241 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 NUDT15Q9NV35 164 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 LYARQ9NX58 379 aaKnown RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 TAS2R7Q9NYW3 318 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 CIDEBQ9UHD4 219 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ZNF639Q9UID6 485 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 FAF1Q9UNN5 650 aaPredicted RBP4.62□□□□□ -1.67
SRP54-211ENST00000556445 PLCL2Q9UPR0 1127 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 ANGPT4Q9Y264 503 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 SLC9A8Q9Y2E8 581 aa4.62□□□□□ -1.67
SRP54-211ENST00000556445 DOCK9Q9BZ29 2069 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CEP290O15078 2479 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SPTY2D1-AS1A0A0U1RR47 76 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 TMEM89A2RUT3 159 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ANKRD30BLA7E2S9 258 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 C2orf74A8MZ97 194 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 C10orf142B7Z368 130 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PRR23D1E9PI22 279 aaPredicted RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 PLPP1O14494 284 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 TPST1O60507 370 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 LRP3O75074 770 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SOX30O94993 753 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 BMP10O95393 424 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 C6orf47O95873 294 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SERPINA1P01009 418 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 MT-ND1P03886 318 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 FABP3P05413 133 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 IL3P08700 152 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SLC35G6P0C7Q6 338 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PRR23D2P0DMB1 279 aaPredicted RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 RRASP10301 218 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CHRNB1P11230 501 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PRKACAP17612 351 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 S1PR1P21453 382 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 MPZP25189 248 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CDKN2CP42773 168 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CRATP43155 626 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 MAGEA2P43356 314 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 RPS9P46781 194 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 OR3A1P47881 315 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ZNF84P51523 738 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SKP1P63208 163 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 HSF1Q00613 529 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ID2Q02363 134 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 CSTF1Q05048 431 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 MERTKQ12866 999 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 MELKQ14680 651 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 ZIC1Q15915 447 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 SLC5A12Q1EHB4 618 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PLK5Q496M5 336 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 GTDC1Q4AE62 458 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 AGAP6Q5VW22 663 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 PQLC2Q6ZP29 291 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 Q6ZSR6 202 aa4.61□□□□□ -1.67
SRP54-211ENST00000556445 MEPCEQ7L2J0 689 aaKnown RBP4.61□□□□□ -1.67
SRP54-211ENST00000556445 YRDCQ86U90 279 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms